RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 ZNF569Q5MCW4 686 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
SND1-215ENST00000492772 IRF2BP2Q7Z5L9 587 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 TMEM135Q86UB9 458 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 RBM12BQ8IXT5 1001 aaKnown RBP10.85□□□□□ -0.67
SND1-215ENST00000492772 LPCAT1Q8NF37 534 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 CCHCR1Q8TD31 782 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 CT55Q8WUE5 264 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 TEKT4Q8WW24 435 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 ZDHHC12Q96GR4 267 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 WDR24Q96S15 920 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 BRD8Q9H0E9 1235 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 ACTL8Q9H568 366 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 PCDH9Q9HC56 1237 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 LHX9Q9NQ69 397 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 KLC4Q9NSK0 619 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 POT1Q9NUX5 634 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 CHKBQ9Y259 395 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 PCDHGA9Q9Y5G4 932 aaKnown RBP10.85□□□□□ -0.67
SND1-215ENST00000492772 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
SND1-215ENST00000492772 TNRC6AQ8NDV7 1962 aaKnown RBP10.85□□□□□ -0.67
SND1-215ENST00000492772 RP1L1Q8IWN7 2480 aaPredicted RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 CENPEQ02224 2701 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 PDZK1P1A8MUH7 402 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 DNAJB5O75953 348 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 SORBS2O94875 1100 aaKnown RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 DDAH2O95865 285 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 FTLP02792 175 aaPredicted RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 RARAP10276 462 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 ZNF8P17098 575 aaPredicted RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 LEPRP48357 1165 aaKnown RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 MYL5Q02045 173 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 DSC2Q02487 901 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 GALNT2Q10471 571 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 UGT8Q16880 541 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 INSCQ1MX18 579 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 ANKRD20A8PQ5CZ79 823 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 CACHD1Q5VU97 1274 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 THAP4Q8WY91 577 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 KLHL6Q8WZ60 621 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 MAML1Q92585 1016 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 RSC1A1Q92681 617 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 FATE1Q969F0 183 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 RNF31Q96EP0 1072 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 ELMO2Q96JJ3 720 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 FCRL4Q96PJ5 515 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 TIMM29Q9BSF4 260 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 ZSCAN5AQ9BUG6 496 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 SLC25A23Q9BV35 468 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 GPR87Q9BY21 358 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 OR2AG1Q9H205 316 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 PCDH18Q9HCL0 1135 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 ATXN10Q9UBB4 475 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 MAP4K5Q9Y4K4 846 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 TTLL3Q9Y4R7 772 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 SLC30A1Q9Y6M5 507 aa10.84□□□□□ -0.67
SND1-215ENST00000492772 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
SND1-215ENST00000492772 MATN3O15232 486 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 MFSD11O43934 449 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 PRLP01236 227 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 TCF4P15884 667 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 SLC19A1P41440 591 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 DCDC1P59894 354 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 TUBB3Q13509 450 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 PIGHQ14442 188 aaPredicted RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 KRT81Q14533 505 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 ASIC2Q16515 512 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 IFI16Q16666 785 aaKnown RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 TDRD12Q587J7 1177 aaKnown RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 PDPK2PQ6A1A2 396 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 CRTC3Q6UUV7 619 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 SYVN1Q86TM6 617 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 LRRTM4Q86VH4 590 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.83□□□□□ -0.68
SND1-215ENST00000492772 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 TRIM55Q9BYV6 548 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 SLC29A3Q9BZD2 475 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 RAB33BQ9H082 229 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 TRIM39Q9HCM9 518 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 RAD18Q9NS91 495 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 SCHIP1Q9P0W5 487 aaPredicted RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 ZNF624Q9P2J8 865 aaPredicted RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 NFKBIL1Q9UBC1 381 aaPredicted RBP10.83□□□□□ -0.68
SND1-215ENST00000492772 EPHA6Q9UF33 1036 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 RARRES3Q9UL19 164 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 PCDHGB7Q9Y5F8 929 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 SHANK1Q9Y566 2161 aa10.83□□□□□ -0.68
SND1-215ENST00000492772 LRRC10BA6NIK2 292 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 LRRC53A6NM62 1247 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 ANKRD66B4E2M5 251 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 CHUKO15111 745 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 KMOO15229 486 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 KIF1CO43896 1103 aaKnown RBP10.82□□□□□ -0.68
SND1-215ENST00000492772 SEMA7AO75326 666 aa10.82□□□□□ -0.68
SND1-215ENST00000492772 SLC25A14O95258 325 aaPredicted RBP10.82□□□□□ -0.68
SND1-215ENST00000492772 ZNF7P17097 686 aaPredicted RBP10.82□□□□□ -0.68
SND1-215ENST00000492772 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
SND1-215ENST00000492772 CCNCP24863 283 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms