RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TC2NQ8N9U0 490 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SPATA22Q8NHS9 363 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 HTR3CQ8WXA8 447 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 GLYATL1Q969I3 302 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 AGAP3Q96P47 875 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 PLEKHG4BQ96PX9 1271 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TEFMQ96QE5 360 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 FCRL5Q96RD9 977 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 VAT1Q99536 393 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC38A3Q99624 504 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TIMM29Q9BSF4 260 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 MAK16Q9BXY0 300 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 DEF6Q9H4E7 631 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TRABDQ9H4I3 376 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SUDS3Q9H7L9 328 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 PRDM8Q9NQV8 689 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 STARD5Q9NSY2 213 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 OCIAD1Q9NX40 245 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF624Q9P2J8 865 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SAE1Q9UBE0 346 aaPredicted RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 CPNE7Q9UBL6 633 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC23A2Q9UGH3 650 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TTLL3Q9Y4R7 772 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 SPO11Q9Y5K1 396 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 ALG6Q9Y672 507 aa8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF106Q9H2Y7 1883 aaKnown RBP8.27□□□□□ -1.09
SMARCB1-207ENST00000491967 TRBV23OR9-2A0A075B6M9 112 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 hCG_1818297A0A087WSY0 165 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 A0A0A6YYK5 440 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 AKR1B15C9JRZ8 316 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 GAPDHSO14556 408 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 AURKAO14965 403 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 KMOO15229 486 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 DUX1O43812 170 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 VEGFDO43915 354 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 CST8O60676 142 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC25A14O95258 325 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ASMTLO95671 621 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 KRT1P04264 644 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ACP5P13686 325 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 BRAFP15056 766 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 PECAM1P16284 738 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF7P17097 686 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 FECHP22830 423 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 CSTF2P33240 577 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 NOP2P46087 812 aaKnown RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 RAB15P59190 212 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 MSLNQ13421 630 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TBR1Q16650 682 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 KHDC1Q4VXA5 237 aaKnown RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TFDP3Q5H9I0 405 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 MANEAQ5SRI9 462 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF648Q5T619 568 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 DCAF12Q5T6F0 453 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SPOCD1Q6ZMY3 1216 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 VASH2Q86V25 355 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF761Q86XN6 746 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 CCDC112Q8NEF3 446 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TFB1MQ8WVM0 346 aaKnown RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ART4Q93070 314 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 RTP4Q96DX8 246 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 MRGPRX2Q96LB1 330 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 ZPBPQ9BS86 351 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SPATA16Q9BXB7 569 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 RAB33BQ9H082 229 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 OR2AG1Q9H205 316 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TSPY26PQ9H489 355 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 IL26Q9NPH9 171 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 IGSF5Q9NSI5 407 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SIDT1Q9NXL6 827 aaKnown RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC39A1Q9NY26 324 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 IL17CQ9P0M4 197 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SEMA5BQ9P283 1151 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 FAM153AQ9UHL3 310 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 SHOC2Q9UQ13 582 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 KCNK6Q9Y257 313 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 EFR3BQ9Y2G0 817 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 TMEM184BQ9Y519 407 aaPredicted RBP8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
SMARCB1-207ENST00000491967 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 GOLGA6L3A6NEY3 463 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 EFCAB7A8K855 629 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 HACD1B0YJ81 288 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 J3QKU1 62 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 KCNJ13O60928 360 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 PPFIA2O75334 1257 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 PMPCBO75439 489 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ZRANB2O95218 330 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 TPM1P09493 284 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms