RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZNF148Q9UQR1 794 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 R3HDM2Q9Y2K5 976 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 RGSL1A5PLK6 1076 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 AGRPO00253 132 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 PLD2O14939 933 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 KCNN4O15554 427 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 PMPCBO75439 489 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ITGA2BP08514 1039 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 CD1CP29017 333 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ACTR1BP42025 376 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ACTR1AP61163 376 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 CDK18Q07002 472 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC14A2Q15849 920 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 PCSK7Q16549 785 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 CCNG2Q16589 344 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF648Q5T619 568 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 KDELC1Q6UW63 502 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 USP53Q70EK8 1073 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 HTR3CQ8WXA8 447 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 FCRL3Q96P31 734 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 CDH19Q9H159 772 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 CPNE5Q9HCH3 593 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 MAGEE1Q9HCI5 957 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ARFGAP3Q9NP61 516 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 UBP1Q9NZI7 540 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 VPS18Q9P253 973 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 TMPRSS11EQ9UL52 423 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF711Q9Y462 761 aa12.57□□□□□ -0.4
SEC61A1-206ENST00000491668 BOD1L1Q8NFC6 3051 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 A6NCN8 305 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 FANCGO15287 622 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 KLK10O43240 276 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 LIASO43766 372 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 PYGLP06737 847 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 BPIP17213 487 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ITIH1P19827 911 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 NFKB1P19838 968 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 RBL1P28749 1068 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 CSF2RBP32927 897 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ETV5P41161 510 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 MLLT3P42568 568 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 CHRNA4P43681 627 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 CLN3Q13286 438 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 C16orf72Q14CZ0 275 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 AMZ1Q400G9 498 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 KHDC1Q4VXA5 237 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 NKAIN2Q5VXU1 208 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ALS2CLQ60I27 953 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 GALNT13Q8IUC8 556 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 CREG2Q8IUH2 290 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 SFRP1Q8N474 314 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 FBXO39Q8N4B4 442 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 KCNE4Q8WWG9 221 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 OXNAD1Q96HP4 312 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 TMEM74Q96NL1 305 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 C10orf88Q9H8K7 445 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ZFYVE1Q9HBF4 777 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 PKD2L2Q9NZM6 624 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 KLHL8Q9P2G9 620 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 NFKBIL1Q9UBC1 381 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 TBC1D29Q9UFV1 150 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNHIT2Q9UHR6 403 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 PCDHGA7Q9Y5G6 932 aa12.56□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TRBV23OR9-2A0A075B6M9 112 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 LOC285095A0A1B0GVY8 99 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 RHPN2P1A8MT19 583 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 F5H423 210 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TMX2-CTNND1H3BSU7 103 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 ASMTLO95671 621 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CPNE6O95741 557 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 NDST3O95803 873 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 IFNB1P01574 187 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF8P17098 575 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 ALDH4A1P30038 563 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC5A2P31639 672 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CA5AP35218 305 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 WNT3AP56704 352 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 DCDC1P59894 354 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CXADRP78310 365 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CKAP4Q07065 602 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 EIF3IQ13347 325 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 COL9A2Q14055 689 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 LRP8Q14114 963 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 PID1Q7Z2X4 250 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF761Q86XN6 746 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 PRELID2Q8N945 189 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 FAM71DQ8N9W8 422 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CCHCR1Q8TD31 782 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC37A2Q8TED4 501 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms