RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 SLC30A9Q6PML9 568 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CRTC3Q6UUV7 619 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SYT10Q6XYQ8 523 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CHST15Q7LFX5 561 aaPredicted RBP16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CHCHD4Q8N4Q1 142 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 IFI44Q8TCB0 444 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 DPEP2Q9H4A9 486 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 CRLS1Q9UJA2 301 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TCAF1Q9Y4C2 921 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ST14Q9Y5Y6 855 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 SLC30A1Q9Y6M5 507 aa16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 ARID1BQ8NFD5 2236 aaPredicted RBP16.09■□□□□ 0.17
MSH5-SAPCD1-206ENST00000491552 TCRBV7S3A2A0A539 114 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CCDC78A2IDD5 438 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 EME2A4GXA9 379 aaPredicted RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 KMOO15229 486 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 HYAL3O43820 417 aaPredicted RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 GP1BAP07359 652 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ACP5P13686 325 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ADRA1DP25100 572 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PSMA3P25788 255 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 AKT1P31749 480 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SESN2P58004 480 aaPredicted RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SKIDA1Q1XH10 827 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TSTD2Q5T7W7 516 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 LRRC8BQ6P9F7 803 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 DHRS13Q6UX07 377 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ZNF534Q76KX8 674 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 EFL1Q7Z2Z2 1120 aaKnown RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SNX20Q7Z614 316 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 LRRTM4Q86VH4 590 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PPHLN1Q8NEY8 458 aaKnown RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 GPR156Q8NFN8 814 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CPT1BQ92523 772 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SLCO2A1Q92959 643 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 NAT6Q93015 286 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ULK4Q96C45 1275 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TTC25Q96NG3 672 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 RUNDC3BQ96NL0 473 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SPATS2LQ9NUQ6 558 aaKnown RBP16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PCYOX1Q9UHG3 505 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 RIMKLBQ9ULI2 386 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PADI4Q9UM07 663 aa16.08■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PLXNB3Q9ULL4 1909 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CACNA1AO00555 2505 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CPED1A4D0V7 1026 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 AGAP14A8MT82 685 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CCDC188H7C350 402 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 NOBOXO60393 691 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TOP3BO95985 862 aaKnown RBP16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 MSH3P20585 1137 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 NPY2RP49146 381 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SARNPP82979 210 aaKnown RBP16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 E2F1Q01094 437 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PLA2G4EQ3MJ16 856 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 C14orf28Q4W4Y0 310 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ZRANB3Q5FWF4 1079 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 NLRP9Q7RTR0 991 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TRAPPC5Q8IUR0 188 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 KLHL7Q8IXQ5 586 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 OR6C4Q8NGE1 309 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CDKN2AIPNLQ96HQ2 116 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 WASF3Q9UPY6 502 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 KCNK6Q9Y257 313 aa16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CNOT1A5YKK6 2376 aaKnown RBP16.07■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TMEM63AO94886 807 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 MGAT1P26572 445 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ARSDP51689 593 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SHC2P98077 582 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CACNG1Q06432 222 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PTK6Q13882 451 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 INSCQ1MX18 579 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 GPR33Q49SQ1 333 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PCID2Q5JVF3 399 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PERM1Q5SV97 790 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ZNF547Q8IVP9 402 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SFTPA2Q8IWL1 248 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 NXPE1Q8N323 547 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 RASGEF1AQ8N9B8 481 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 OR13J1Q8NGT2 312 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PEX13Q92968 403 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 C16orf45Q96MC5 204 aaPredicted RBP16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TIMM29Q9BSF4 260 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SCNM1Q9BWG6 230 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 IL22Q9GZX6 179 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 FAM96AQ9H5X1 160 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ASIC3Q9UHC3 531 aa16.06■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TRBV5-4A0A0C4DH59 114 aa16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 RALBP11234 206 aa16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 ZNF7P17097 686 aaPredicted RBP16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SPINK2P20155 84 aa16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PTGIRP43119 386 aa16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 CLCNKAP51800 687 aa16.05■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 MAZP56270 477 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms