RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PDZK1P1A8MUH7 402 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 FADS2P1A8MWK0 482 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PPM1DO15297 605 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 VIPP01282 170 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 HGFP14210 728 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 NFKB1P19838 968 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PTPN7P35236 360 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 RAB15P59190 212 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PDE1BQ01064 536 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 LLGL1Q15334 1064 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 LDLRAP1Q5SW96 308 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 CYB5D1Q6P9G0 228 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 GLT6D1Q7Z4J2 308 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 RBM12BQ8IXT5 1001 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 RNF10Q8N5U6 811 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 TTC13Q8NBP0 860 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 GPR26Q8NDV2 337 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 IPMKQ8NFU5 416 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 BLOC1S5Q8TDH9 187 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 SLC37A2Q8TED4 501 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PATE1Q8WXA2 126 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 NCSTNQ92542 709 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 QKIQ96PU8 341 aaKnown RBP eCLIP16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 TEFMQ96QE5 360 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 VPS35Q96QK1 796 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 NUDT22Q9BRQ3 303 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 ARHGAP9Q9BRR9 750 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 HEMGNQ9BXL5 484 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 ATXN10Q9UBB4 475 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PRKAB1Q9Y478 270 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PLEKHM1Q9Y4G2 1056 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 PCDHA3Q9Y5H8 950 aa16.37■□□□□ 0.21
PDLIM2-217ENST00000491330 CACNA1GO43497 2377 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 IGHV5-10-1A0A0J9YXX1 117 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 MIF4GDA9UHW6 222 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 K7ENP7 123 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 AGRPO00253 132 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 STX7O15400 261 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 ZNF7P17097 686 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 ZNF8P17098 575 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 AMD1P17707 334 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 SPAM1P38567 509 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 MAPK9P45984 424 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 CLN3Q13286 438 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 NFATC2Q13469 925 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 COL9A2Q14055 689 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 IHHQ14623 411 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 DARS2Q6PI48 645 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 INO80CQ6PI98 192 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 WDR74Q6RFH5 385 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 FAM129CQ86XR2 697 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 TRAPPC5Q8IUR0 188 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 TMEM139Q8IV31 216 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 SLC25A41Q8N5S1 370 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 TADA1Q96BN2 335 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 CXorf40BQ96DE9 158 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 ZNF514Q96K75 400 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 ZPBPQ9BS86 351 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 TIMM29Q9BSF4 260 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 SLC39A1Q9NY26 324 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 TBC1D29Q9UFV1 150 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 AMFRQ9UKV5 643 aa16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 CNOT6Q9ULM6 557 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 OAS3Q9Y6K5 1087 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-217ENST00000491330 PRAMEF33A0A0G2JMD5 474 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 LOC285095A0A1B0GVY8 99 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 KLHL33A6NCF5 533 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 PRAMEF10O60809 474 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 RALBP11234 206 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 PECAM1P16284 738 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 BPIP17213 487 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 ITIH1P19827 911 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 WASHC5Q12768 1159 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 NKAIN2Q5VXU1 208 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 KLHL35Q6PF15 583 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 CRTC3Q6UUV7 619 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 B4GALNT4Q76KP1 1039 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 ADGRG6Q86SQ4 1221 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 SFTPA2Q8IWL1 248 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 ZNF567Q8N184 647 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 PTCD2Q8WV60 388 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 WDR24Q96S15 920 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 OSBPL8Q9BZF1 889 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 BPIFA1Q9NP55 256 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 CPNE7Q9UBL6 633 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 MYLKQ15746 1914 aa16.35■□□□□ 0.21
PDLIM2-217ENST00000491330 GLYATL1P3A0A0U1RQE8 302 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 C5orf60A6NFR6 353 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 B4E171 279 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 ARHGAP6O43182 974 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 CRTAMO95727 393 aa16.34■□□□□ 0.21
PDLIM2-217ENST00000491330 SFTPCP11686 197 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms