RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.67□□□□□ -1.82
PHC3-213ENST00000491258 FAM96BQ9Y3D0 163 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ATRNO75882 1429 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 NOTCH2Q04721 2471 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 UNC13BO14795 1591 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 DIP2AQ14689 1571 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 MYOM2P54296 1465 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 AHDC1Q5TGY3 1603 aaPredicted RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 SBNO1A3KN83 1393 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 CTAGE9A4FU28 777 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 CTAGE8P0CG41 777 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 DPEP1P16444 411 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 POU1F1P28069 291 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 HOXA13P31271 388 aaPredicted RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 C2orf68Q2NKX9 166 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 ZNF667Q5HYK9 610 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 RAD9BQ6WBX8 426 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 TOGARAM2Q6ZUX3 1019 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 TADA2BQ86TJ2 420 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 MYLK4Q86YV6 388 aaPredicted RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 CTAGE4Q8IX94 777 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 STAMQ92783 540 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 QRFPRQ96P65 431 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 VGLL1Q99990 258 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 BICC1Q9H694 974 aaKnown RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 FGF22Q9HCT0 170 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 POLG2Q9UHN1 485 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 LSM4Q9Y4Z0 139 aaKnown RBP3.66□□□□□ -1.82
PHC3-213ENST00000491258 RGS12O14924 1447 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 PTPRCP08575 1304 aa3.66□□□□□ -1.82
PHC3-213ENST00000491258 NEXMIFQ5QGS0 1516 aa3.65□□□□□ -1.82
PHC3-213ENST00000491258 KLK10O43240 276 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 MT-CYBP00156 380 aaPredicted RBP3.65□□□□□ -1.83
PHC3-213ENST00000491258 MAP2K2P36507 400 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 TECRLQ5HYJ1 363 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 METTL2BQ6P1Q9 378 aaKnown RBP3.65□□□□□ -1.83
PHC3-213ENST00000491258 DUS1LQ6P1R4 473 aaKnown RBP3.65□□□□□ -1.83
PHC3-213ENST00000491258 TDRPQ86YL5 185 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 HMGCLL1Q8TB92 370 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 RILPL2Q969X0 211 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 METTL2AQ96IZ6 378 aaKnown RBP3.65□□□□□ -1.83
PHC3-213ENST00000491258 POM121L2Q96KW2 1035 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 EYA3Q99504 573 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 HINT3Q9NQE9 182 aaKnown RBP3.65□□□□□ -1.83
PHC3-213ENST00000491258 CACNG5Q9UF02 275 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 RASAL2Q9UJF2 1139 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 IQGAP3Q86VI3 1631 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 NRXN1Q9ULB1 1477 aa3.65□□□□□ -1.83
PHC3-213ENST00000491258 ARHGEF10O15013 1369 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 GPRASP1Q5JY77 1395 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 STRCP1A6NGW2 1772 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 COL16A1Q07092 1604 aaPredicted RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 F5H423 210 aaPredicted RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 H7C423 109 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 CLIC2O15247 247 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 PRC1O43663 620 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 CTSVO60911 334 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 FAM106CPP0CH98 169 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 MRPS5P82675 430 aaKnown RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 GGNBP1Q5YKI7 109 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 C1orf228Q6PIY5 440 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 CPLX2Q6PUV4 134 aaKnown RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 DEFB132Q7Z7B7 95 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 ADGRG6Q86SQ4 1221 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 DHX40Q8IX18 779 aaKnown RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 PCDH20Q8N6Y1 951 aaKnown RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 HUS1BQ8NHY5 278 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 POF1BQ8WVV4 589 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 PAGR1Q9BTK6 254 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 PLEKHA4Q9H4M7 779 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 NOD2Q9HC29 1040 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 DAAM1Q9Y4D1 1078 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 PXDNQ92626 1479 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 KDM5AP29375 1690 aaKnown RBP3.64□□□□□ -1.83
PHC3-213ENST00000491258 SLIT2O94813 1529 aa3.64□□□□□ -1.83
PHC3-213ENST00000491258 SMCHD1A6NHR9 2005 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 TNS3Q68CZ2 1445 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 ANKARQ7Z5J8 1434 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 ROBO1Q9Y6N7 1651 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 A0A087X002 238 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 VWA3AA6NCI4 1184 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 HEXAP06865 529 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 VEGFAP15692 232 aaPredicted RBP3.63□□□□□ -1.83
PHC3-213ENST00000491258 SHMT1P34896 483 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 SORDQ00796 357 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 PPP2R5BQ15173 497 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 ZC2HC1CQ53FD0 456 aaPredicted RBP3.63□□□□□ -1.83
PHC3-213ENST00000491258 FGFBP3Q8TAT2 258 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 SLC38A5Q8WUX1 472 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 RUFY2Q8WXA3 655 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 ORAI1Q96D31 301 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 ARHGEF26Q96DR7 871 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 MPHOSPH8Q99549 860 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 FAM167BQ9BTA0 163 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 CABLES2Q9BTV7 478 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 TAOK3Q9H2K8 898 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 CCDC177Q9NQR7 707 aaPredicted RBP3.63□□□□□ -1.83
PHC3-213ENST00000491258 FEM1BQ9UK73 627 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 CEP152O94986 1710 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms