RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TMEM74Q96NL1 305 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 RANBP9Q96S59 729 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ENPP5Q9UJA9 477 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SOBPA7XYQ1 873 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 M0QZ92 97 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 PRKAR1AP10644 381 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 NOVP48745 357 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ATXN1P54253 815 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 CNTN2Q02246 1040 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TIGD6Q17RP2 521 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 RAP1GAP2Q684P5 730 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 GADL1Q6ZQY3 521 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 IPCEF1Q8WWN9 437 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 CDT1Q9H211 546 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 PDP1Q9P0J1 537 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 RABL2AQ9UBK7 228 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 RPS6KA6Q9UK32 745 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 MAPRE3Q9UPY8 281 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 I3L521 148 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 HAT1O14929 419 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SULT1C4O75897 302 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ALDH1A2O94788 518 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 AKR1D1P51857 326 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 MAPK12P53778 367 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 GABARAPL2P60520 117 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 NCS1P62166 190 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SPCS2Q15005 226 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TAF12Q16514 161 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATS1Q496A3 300 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ZRANB3Q5FWF4 1079 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 PTRHD1Q6GMV3 140 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM117BQ6P1L5 589 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 DSG4Q86SJ6 1040 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 HID1Q8IV36 788 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 WDTC1Q8N5D0 677 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TXNDC5Q8NBS9 432 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 EMILIN2Q9BXX0 1053 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 ITPAQ9BY32 194 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 SPRTNQ9H040 489 aaPredicted RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 OLA1Q9NTK5 396 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 COL20A1Q9P218 1284 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 VPS4AQ9UN37 437 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 CFL2Q9Y281 166 aa11.22□□□□□ -0.61
CRNKL1-204ENST00000490910 A0A1W2PP18 115 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 NME4O00746 187 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 SCELO95171 688 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 CPSF4O95639 269 aaKnown RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 LEPRP48357 1165 aaKnown RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 GLUD2P49448 558 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF132P52740 706 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 NRG1Q02297 640 aaPredicted RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 ACOX1Q15067 660 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 EEF1DP3Q658K8 133 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 NCBP2-AS2Q69YL0 99 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 TYW3Q6IPR3 259 aaKnown RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 MILR1Q7Z6M3 343 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 SCN4BQ8IWT1 228 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 SPARTQ8N0X7 666 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 EFHBQ8N7U6 833 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 OR10A6Q8NH74 314 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 TEX12Q9BXU0 123 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC22A4Q9H015 551 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 OR12D3Q9UGF7 316 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 ENOPH1Q9UHY7 261 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 C12orf71A8MTZ7 269 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 MYL12BO14950 172 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 RGS14O43566 566 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 UPK1BO75841 260 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 AHSGP02765 367 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 IMPDH1P20839 514 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 OLIG2Q13516 323 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 DESI1Q6ICB0 168 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 SULT1C3Q6IMI6 304 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 RPS27LQ71UM5 84 aaKnown RBP11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 CPNE9Q8IYJ1 553 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 UBE2J2Q8N2K1 259 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 KDM1BQ8NB78 822 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 EDEM1Q92611 657 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 RTP4Q96DX8 246 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 BCL7BQ9BQE9 202 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 TRIM8Q9BZR9 551 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 TAS2R9Q9NYW1 312 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 ZMYM5Q9UJ78 669 aa11.21□□□□□ -0.61
CRNKL1-204ENST00000490910 HSD17B1P14061 328 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 PNPLA4P41247 253 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 ATP4BP51164 291 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 RPL38P63173 70 aaKnown RBP11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 LCP2Q13094 533 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 DET1Q7L5Y6 550 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 GPSM1Q86YR5 675 aa11.21□□□□□ -0.62
CRNKL1-204ENST00000490910 DIRAS2Q96HU8 199 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms