RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ENTPD8	Q5MY95	495 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	MPP7	Q5T2T1	576 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	UBAP2	Q5T6F2	1119 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	C12orf60	Q5U649	245 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TPGS2	Q68CL5	300 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ETFRF1	Q6IPR1	90 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	FBXL22	Q6P050	247 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	AADACL2	Q6P093	401 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CYB5R4	Q7L1T6	521 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	PLPPR4	Q7Z2D5	763 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CACNA2D4	Q7Z3S7	1137 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ADGRG6	Q86SQ4	1221 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	DNAAF5	Q86Y56	855 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SPATA2L	Q8IUW3	424 aa	Predicted RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	CCDC105	Q8IYK2	499 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	MYOCD	Q8IZQ8	938 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SYCP3	Q8IZU3	236 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	MMP21	Q8N119	569 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	PDCL2	Q8N4E4	241 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ARFGAP1	Q8N6T3	406 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SCAI	Q8N9R8	606 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CNNM3	Q8NE01	707 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TNIP2	Q8NFZ5	429 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	OR6C4	Q8NGE1	309 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	NFKBID	Q8NI38	313 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	MPLKIP	Q8TAP9	179 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	AGR3	Q8TD06	166 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	KCNE4	Q8WWG9	221 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	PRCC	Q92733	491 aa	Predicted RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	PDLIM5	Q96HC4	596 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	RMDN2	Q96LZ7	410 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	NLRP4	Q96MN2	994 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TCEANC2	Q96MN5	208 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	FAM111A	Q96PZ2	611 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	GCNA	Q96QF7	691 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ABHD1	Q96SE0	405 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	PKP4	Q99569	1192 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SH3GL2	Q99962	352 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	NACAP1	Q9BZK3	213 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SLC5A7	Q9GZV3	580 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	INTS2	Q9H0H0	1204 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	STMN4	Q9H169	189 aa	Predicted RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	HSD3B7	Q9H2F3	369 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	HIPK3	Q9H422	1215 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	STN1	Q9H668	368 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	DNAJC18	Q9H819	358 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CRLF2	Q9HC73	371 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TM9SF3	Q9HD45	589 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	IL1RAPL2	Q9NP60	686 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	SIRT3	Q9NTG7	399 aa	Predicted RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	SLC35D1	Q9NTN3	355 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ABCB8	Q9NUT2	735 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ATAD3A	Q9NVI7	634 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ZDHHC7	Q9NXF8	308 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	IPO11	Q9UI26	975 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	CNOT7	Q9UIV1	285 aa	Known RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	SLC25A13	Q9UJS0	675 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	GRID1	Q9ULK0	1009 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	ICK	Q9UPZ9	632 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CHKB	Q9Y259	395 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	GDA	Q9Y2T3	454 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	PCDHGA1	Q9Y5H4	931 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	CLDN16	Q9Y5I7	305 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TRPV2	Q9Y5S1	764 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	HS3ST3B1	Q9Y662	390 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444		V9GYY5	206 aa	Predicted RBP	2.57	□□□□□ -2
PUM3-204	ENST00000490444	TTC21B	Q7Z4L5	1316 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	TMEM94	Q12767	1356 aa		2.57	□□□□□ -2
PUM3-204	ENST00000490444	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	TARSL2	A2RTX5	802 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	EME2	A4GXA9	379 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	MYO1G	B0I1T2	1018 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444		B4DGG1	531 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PSMD14	O00487	310 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	MDM4	O15151	490 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	GUCY1B2	O75343	617 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TULP3	O75386	442 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	NDUFB8	O95169	186 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	GAS8-AS1	O95177	125 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TOMM40	O96008	361 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	HLA-DQA2	P01906	255 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	T-ENOL	P0DO92	83 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CHRNA5	P30532	468 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	BSG	P35613	385 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SLC16A2	P36021	539 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	USP8	P40818	1118 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CDKN2A	P42771	156 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	CAMLG	P49069	296 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	HSD17B4	P51659	736 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	GBX2	P52951	348 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	ATXN3	P54252	364 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	HAND2	P61296	217 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	MRPS5	P82675	430 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	CCDC173	Q0VFZ6	552 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TEF	Q10587	303 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PMPCA	Q10713	525 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	NPRL3	Q12980	569 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	IK	Q13123	557 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	TDG	Q13569	410 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms