RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MAGIXQ9H6Y5 334 aa4.99□□□□□ -1.61
CCDC39-206ENST00000489868 KRT84Q9NSB2 600 aa4.99□□□□□ -1.61
CCDC39-206ENST00000489868 TAAR2Q9P1P5 351 aa4.99□□□□□ -1.61
CCDC39-206ENST00000489868 FBXW11Q9UKB1 542 aa4.99□□□□□ -1.61
CCDC39-206ENST00000489868 EIF4E1BA6NMX2 242 aaKnown RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 ERVV-2B6SEH9 535 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 TMEM178BH3BS89 294 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 EIF3DO15371 548 aaKnown RBP eCLIP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 ANXA7P20073 488 aaKnown RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 CAPN3P20807 821 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 MT3P25713 68 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 IL15P40933 162 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 FMO5P49326 533 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 PITX1P78337 314 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 RPL24P83731 157 aaKnown RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 SREBF2Q12772 1141 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 MYLK3Q32MK0 819 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 TMEM35AQ53FP2 167 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 RAB6CQ53S08 254 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 KIAA0930Q6ICG6 404 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 JADE1Q6IE81 842 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 KLHL35Q6PF15 583 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 KCTD8Q6ZWB6 473 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 DCUN1D3Q8IWE4 304 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 RBM15BQ8NDT2 890 aaKnown RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 CMTM3Q96MX0 182 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 PGLYRP2Q96PD5 576 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 OR2A14Q96R47 310 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 POLR3CQ9BUI4 534 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-206ENST00000489868 RAB6CQ9H0N0 254 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 EPB41L5Q9HCM4 733 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 B3GALT5Q9Y2C3 310 aa4.98□□□□□ -1.61
CCDC39-206ENST00000489868 GREB1LQ9C091 1923 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 OR5K3A6NET4 321 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 SCAMP1O15126 338 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 SP1P08047 785 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 PDE1CQ14123 709 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 C19orf48Q6RUI8 117 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 NFE4Q86UQ8 179 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 SLC38A9Q8NBW4 561 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 UTP15Q8TED0 518 aaKnown RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 TRPC4APQ8TEL6 797 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 LINGO1Q96FE5 620 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 ZNF583Q96ND8 569 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 GAD1Q99259 594 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 GFI1Q99684 422 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 TXLNGQ9NUQ3 528 aa4.97□□□□□ -1.61
CCDC39-206ENST00000489868 SEPT11Q9NVA2 429 aaKnown RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 UBA2Q9UBT2 640 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 TMEM184BQ9Y519 407 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-206ENST00000489868 KANSL1LA0AUZ9 987 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 MAP2K7O14733 419 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 PTP4A3O75365 173 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 DAB1O75553 588 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 BAIAP3O94812 1187 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 ATP1A1P05023 1023 aaKnown RBP4.96□□□□□ -1.62
CCDC39-206ENST00000489868 SELLP14151 372 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 GABRB1P18505 474 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 HRH2P25021 359 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 PPARGP37231 505 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-206ENST00000489868 HADHAP40939 763 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 RXRGP48443 463 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 ARCN1P48444 511 aaKnown RBP4.96□□□□□ -1.62
CCDC39-206ENST00000489868 AMPHP49418 695 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 SIRPB2Q5JXA9 342 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 ZNF704Q6ZNC4 412 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-206ENST00000489868 PM20D2Q8IYS1 436 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 UHRF2Q96PU4 802 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
CCDC39-206ENST00000489868 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 LRRC1Q9BTT6 524 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 SIL1Q9H173 461 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 HCFC1R1Q9NWW0 138 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 PRAG1Q86YV5 1406 aa4.96□□□□□ -1.62
CCDC39-206ENST00000489868 FAM172BPA6NC97 362 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 SMAD9O15198 467 aaKnown RBP4.95□□□□□ -1.62
CCDC39-206ENST00000489868 LINC01565O15544 149 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 KRT86O43790 486 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 SLC22A3O75751 556 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 ACADMP11310 421 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 GM2AP17900 193 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 TIMP3P35625 211 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 ARL3P36405 182 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 GARSP41250 739 aaKnown RBP4.95□□□□□ -1.62
CCDC39-206ENST00000489868 GPR143P51810 404 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 EEF1A1P68104 462 aaKnown RBP4.95□□□□□ -1.62
CCDC39-206ENST00000489868 PLIN5Q00G26 463 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 MAMLD1Q13495 774 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 KRT81Q14533 505 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 PCGF3Q3KNV8 242 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 EEF1A1P5Q5VTE0 462 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 ACSM2BQ68CK6 577 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 CEP97Q8IW35 865 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 DMBX1Q8NFW5 382 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 LRRC8CQ8TDW0 803 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 TMEM255BQ8WV15 326 aa4.95□□□□□ -1.62
CCDC39-206ENST00000489868 PHF21AQ96BD5 680 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms