RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 RHDQ02161 417 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 ILF3Q12906 894 aaKnown RBP eCLIP8.83□□□□□ -1
TNRC6B-208ENST00000489500 COL9A2Q14055 689 aaPredicted RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 DPYSQ14117 519 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 TRIM14Q14142 442 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 PDK2Q15119 407 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 CA9Q16790 459 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 ALG11Q2TAA5 492 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 TSNAXIP1Q2TAA8 658 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SMTNL2Q2TAL5 461 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 LCE4AQ5TA78 99 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SLC6A19Q695T7 634 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 PNCKQ6P2M8 343 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 ALKBH5Q6P6C2 394 aaKnown RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 LIPIQ6XZB0 460 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 POLNQ7Z5Q5 900 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SLC35F3Q8IY50 421 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 NETO2Q8NC67 525 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 KCTD6Q8NC69 237 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 FAM46DQ8NEK8 389 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 DNAJB8Q8NHS0 232 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 PCDH19Q8TAB3 1148 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 CPLX3Q8WVH0 158 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 CTNNBL1Q8WYA6 563 aaPredicted RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 Q96M66 194 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 NAP1L5Q96NT1 182 aaPredicted RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 PEBP4Q96S96 227 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 RBM15Q96T37 977 aaKnown RBP eCLIP8.83□□□□□ -1
TNRC6B-208ENST00000489500 NUP85Q9BW27 656 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 GSDMCQ9BYG8 508 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 POLR1EQ9GZS1 481 aaKnown RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 DPEP2Q9H4A9 486 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 GOLGA6AQ9NYA3 693 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SLAMF8Q9P0V8 285 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SIRPGQ9P1W8 387 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 AMACRQ9UHK6 382 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 CAPN11Q9UMQ6 739 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 SATB2Q9UPW6 733 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 OR1A2Q9Y585 309 aa8.83□□□□□ -1
TNRC6B-208ENST00000489500 ARHGEF17Q96PE2 2063 aaPredicted RBP8.83□□□□□ -1
TNRC6B-208ENST00000489500 CHD6Q8TD26 2715 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 LY6G6EA0A0G2JKS1 128 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 SYCE3A1L190 88 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 KLK10O43240 276 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 ESR1P03372 595 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 H2AFZP0C0S5 128 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 JMJD7P0C870 316 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 MYCLP1P12525 358 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 MYF5P13349 255 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 ITPKBP27987 946 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 INHBCP55103 352 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 SLC10A7Q0GE19 358 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 IQCB1Q15051 598 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 CLPPQ16740 277 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 SOWAHCQ53LP3 525 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 TAF1BQ53T94 588 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 DENND2CQ68D51 928 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 RAET1GQ6H3X3 334 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 H2AFVQ71UI9 128 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 MCATQ8IVS2 390 aaKnown RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 ARHGAP12Q8IWW6 846 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 FBXO39Q8N4B4 442 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 ATXN7L3BQ96GX2 97 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 NAF1Q96HR8 494 aaKnown RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 SLC46A1Q96NT5 459 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 CSPG4P5Q96PW8 444 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 MGME1Q9BQP7 344 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 MAK16Q9BXY0 300 aaKnown RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 CLPBQ9H078 707 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 THAP2Q9H0W7 228 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 TCEAL2Q9H3H9 227 aaPredicted RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 LRRN3Q9H3W5 708 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 PRORYQ9H606 182 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 EPB41L5Q9HCM4 733 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 SEPT10Q9P0V9 454 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 CTTNBP2NLQ9P2B4 639 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 UVRAGQ9P2Y5 699 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 B4GALT6Q9UBX8 382 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 ENTPD2Q9Y5L3 495 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 CORINQ9Y5Q5 1042 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 U3KQA8 63 aa8.82□□□□□ -1
TNRC6B-208ENST00000489500 ZFC3H1O60293 1989 aaKnown RBP8.82□□□□□ -1
TNRC6B-208ENST00000489500 KIF26BQ2KJY2 2108 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 PRSS38A1L453 326 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 RHPN2P1A8MT19 583 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 A8MX80 341 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 TRAFD1O14545 582 aaPredicted RBP8.81□□□□□ -1
TNRC6B-208ENST00000489500 HTRA2O43464 458 aaPredicted RBP8.81□□□□□ -1
TNRC6B-208ENST00000489500 MAFKO60675 156 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 TNFSF15O95150 251 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 PRKCGP05129 697 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 CYP1A2P05177 515 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 RPLP0P05388 317 aaKnown RBP8.81□□□□□ -1
TNRC6B-208ENST00000489500 ITGA2BP08514 1039 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 ZNF30P17039 623 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 TEAD1P28347 426 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 TRIM23P36406 574 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 GPR1P46091 355 aa8.81□□□□□ -1
TNRC6B-208ENST00000489500 PPM1FP49593 454 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms