RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 C3orf38Q5JPI3 329 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 RANBP10Q6VN20 620 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 C17orf82Q86X59 251 aaPredicted RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 AVL9Q8NBF6 648 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 ATXN7L3BQ96GX2 97 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 ZNF578Q96N58 590 aaPredicted RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 TBL1YQ9BQ87 522 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 ZCCHC2Q9C0B9 1178 aaKnown RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 CPNE5Q9HCH3 593 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 EPB41L5Q9HCM4 733 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 ARFGAP3Q9NP61 516 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 IL26Q9NPH9 171 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 IL17CQ9P0M4 197 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 ENTPD2Q9Y5L3 495 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 A0A1W2PQM1 296 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 D6RAR5 112 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 KMOO15229 486 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SNX2O60749 519 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 ZNF8P17098 575 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 VCLP18206 1134 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 LPOP22079 712 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 ADRA1AP35348 466 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 GPR3P46089 330 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 INHBCP55103 352 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 CLPPQ16740 277 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 INSCQ1MX18 579 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 MAP9Q49MG5 647 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 FOXR1Q6PIV2 292 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 FAM151BQ6UXP7 276 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 ADGRG6Q86SQ4 1221 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SLC9B2Q86UD5 537 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 SFTPA2Q8IWL1 248 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 NAGSQ8N159 534 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SLC35B2Q8TB61 432 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 SH3KBP1Q96B97 665 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 UBL7Q96S82 380 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 APOL2Q9BQE5 337 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 TMEM121Q9BTD3 319 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 LRRC40Q9H9A6 602 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 THSD1Q9NS62 852 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 KCNK6Q9Y257 313 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 R3HDM2Q9Y2K5 976 aaKnown RBP13.34□□□□□ -0.27
LMO4-203ENST00000489303 LRP4O75096 1905 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 KIF26BQ2KJY2 2108 aa13.34□□□□□ -0.27
LMO4-203ENST00000489303 RP1P56715 2156 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 TRBV23OR9-2A0A075B6M9 112 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 EIF4E1BA6NMX2 242 aaKnown RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 BUD23O43709 281 aaKnown RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 CPNE6O95741 557 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 PDX1P52945 283 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 B4GALNT1Q00973 533 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 CHRNA6Q15825 494 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 AMZ1Q400G9 498 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ATP13A5Q4VNC0 1218 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ZNF648Q5T619 568 aaPredicted RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 CRTC3Q6UUV7 619 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ZNF438Q7Z4V0 828 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 PIM3Q86V86 326 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 MAIP1Q8WWC4 291 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 PATE1Q8WXA2 126 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 PRR11Q96HE9 360 aaPredicted RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 AHCYL2Q96HN2 611 aaKnown RBP13.33□□□□□ -0.28
LMO4-203ENST00000489303 SLC38A3Q99624 504 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 GORASP1Q9BQQ3 440 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 OSGEPL1Q9H4B0 414 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 KLC4Q9NSK0 619 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 KCNK4Q9NYG8 393 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 PCDHGA8Q9Y5G5 932 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ST14Q9Y5Y6 855 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 ARL5AQ9Y689 179 aa13.33□□□□□ -0.28
LMO4-203ENST00000489303 KIR2DS5A0A0G2JLQ3 304 aa13.32□□□□□ -0.28
LMO4-203ENST00000489303 A0A0G2JNG1 304 aa13.32□□□□□ -0.28
LMO4-203ENST00000489303 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
LMO4-203ENST00000489303 KIR2DS3K7RE56 304 aa13.32□□□□□ -0.28
LMO4-203ENST00000489303 CHUKO15111 745 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms