RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF536O15090 1300 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 H7C0S8 307 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 PRMT5O14744 637 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 CCNKO75909 580 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 STARP49675 285 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 CNTD1Q8N815 330 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 BANPQ8N9N5 519 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 ATAD1Q8NBU5 361 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 BTN2A3PQ96KV6 586 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 IMP3Q9NV31 184 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 SLC17A6Q9P2U8 582 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 PCDHGC3Q9UN70 934 aa17.5■□□□□ 0.39
NPHP4-209ENST00000489180 MRPS23Q9Y3D9 190 aaKnown RBP17.5■□□□□ 0.39
NPHP4-209ENST00000489180 TNFRSF11BO00300 401 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 FFAR2O15552 330 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SLC25A12O75746 678 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 TCEA3O75764 348 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 ANGPTL1O95841 491 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 ALDH4A1P30038 563 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 OR1D2P34982 312 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PLEKHG4Q58EX7 1191 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 HEXDCQ8WVB3 486 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 EBF4Q9BQW3 602 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 GATA5Q9BWX5 397 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 EBPLQ9BY08 206 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 UNC93B1Q9H1C4 597 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 TIMMDC1Q9NPL8 285 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 HECAQ9UBI9 543 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 CCDC162PA2VCL2 907 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SLC9A3R1O14745 358 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PIP5K1BO14986 540 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 GCATO75600 419 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 CES1P23141 567 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SLC5A3P53794 718 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SH3PXD2AQ5TCZ1 1133 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PIK3R6Q5UE93 754 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 ESAMQ96AP7 390 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 FEM1CQ96JP0 617 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 LMAN2LQ9H0V9 348 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 RCOR3Q9P2K3 495 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 hCG_2039718K7EN88 272 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 GMFGO60234 142 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 F7P08709 466 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 EFNA1P20827 205 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SSR2P43308 183 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 C5orf22Q49AR2 442 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 TRMT10BQ6PF06 316 aaKnown RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 ADGRG2Q8IZP9 1017 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 TNKS2Q9H2K2 1166 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PNPLA8Q9NP80 782 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SLC15A5A6NIM6 579 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SCN2BO60939 215 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 KLF1Q13351 362 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 NOL9Q5SY16 702 aaKnown RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 OGFOD2Q6N063 350 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PIGWQ7Z7B1 504 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 UBR7Q8N806 425 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PPTC7Q8NI37 304 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 CHCHD6Q9BRQ6 235 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 NMUR1Q9HB89 426 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PRDM8Q9NQV8 689 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 DNAJC11Q9NVH1 559 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 C5orf60A6NFR6 353 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 PTP4A2Q12974 167 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 MAP2K5Q13163 448 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 CBX3Q13185 183 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 CCNYL2Q5T2Q4 361 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 OLFML2AQ68BL7 652 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 FAM124AQ86V42 546 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 LIX1Q8N485 282 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SIDT2Q8NBJ9 832 aaKnown RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 IPCEF1Q8WWN9 437 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-209ENST00000489180 SEC14L3Q9UDX4 400 aa17.49■□□□□ 0.39
NPHP4-209ENST00000489180 OR4F21O95013 312 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 GOT2P00505 430 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 GABRR2P28476 465 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 IRF9Q00978 393 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 GTF2H2Q13888 395 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CBX2Q14781 532 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 ACAP2Q15057 778 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 SNAPC1Q16533 368 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 C9orf64Q5T6V5 341 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 GTF2H2CQ6P1K8 395 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 AHI1Q8N157 1196 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 XAGE5Q8WWM1 108 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CITED4Q96RK1 184 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 LPIN3Q9BQK8 851 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 COQ10BQ9H8M1 238 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 SEMA3GQ9NS98 782 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 OAS3Q9Y6K5 1087 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 PMF1-BGLAPU3KQ54 211 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 MYPNQ86TC9 1320 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 POU2F1P14859 743 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms