RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 BBS5Q8N3I7 341 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 RBMXL3Q8N7X1 1067 aaKnown RBP15.94■□□□□ 0.14
USP48-210ENST00000489108 RSC1A1Q92681 617 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 OSGEPL1Q9H4B0 414 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 KLC4Q9NSK0 619 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 ETNK2Q9NVF9 386 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 TAB2Q9NYJ8 693 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 FARSAQ9Y285 508 aaKnown RBP15.94■□□□□ 0.14
USP48-210ENST00000489108 SLC5A6Q9Y289 635 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 SIK3Q9Y2K2 1263 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 PCDHGB7Q9Y5F8 929 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 CSMD1Q96PZ7 3565 aa15.94■□□□□ 0.14
USP48-210ENST00000489108 CEACAM4O75871 244 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 KRT38O76015 456 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 CBX6O95503 412 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 NELFEP18615 380 aaKnown RBP15.93■□□□□ 0.14
USP48-210ENST00000489108 AMPD1P23109 780 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 VARSP26640 1264 aaKnown RBP15.93■□□□□ 0.14
USP48-210ENST00000489108 PTGIRP43119 386 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 MMP13P45452 471 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 CLCNKAP51800 687 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 EPHB1P54762 984 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 SYCP1Q15431 976 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 TCP11X2Q5H9J9 407 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 ZNF648Q5T619 568 aaPredicted RBP15.93■□□□□ 0.14
USP48-210ENST00000489108 MARC1Q5VT66 337 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 CYP4V2Q6ZWL3 525 aaPredicted RBP15.93■□□□□ 0.14
USP48-210ENST00000489108 TRIM48Q8IWZ4 208 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 MCOLN2Q8IZK6 566 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 AOPEPQ8N6M6 819 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 FDCSPQ8NFU4 85 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 C5orf34Q96MH7 638 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 AGPAT1Q99943 283 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 CARD9Q9H257 536 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 PDE7BQ9NP56 450 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 ARFGAP3Q9NP61 516 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 NT5MQ9NPB1 228 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 ATXN10Q9UBB4 475 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 RARRES3Q9UL19 164 aa15.93■□□□□ 0.14
USP48-210ENST00000489108 PRPSAP2O60256 369 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 FOLR1P15328 257 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 ZNF8P17098 575 aaPredicted RBP15.92■□□□□ 0.14
USP48-210ENST00000489108 MIPP30301 263 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 ITKQ08881 620 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 IHHQ14623 411 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 KCNAB1Q14722 419 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 ACAD10Q6JQN1 1059 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 IRGCQ6NXR0 463 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 TTC13Q8NBP0 860 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 NSMCE1Q8WV22 266 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 PNPLA2Q96AD5 504 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 SNRNP40Q96DI7 357 aaKnown RBP15.92■□□□□ 0.14
USP48-210ENST00000489108 ZDHHC12Q96GR4 267 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 FCRL4Q96PJ5 515 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 NUDT9Q9BW91 350 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 SLC23A2Q9UGH3 650 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 CHKBQ9Y259 395 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 ADGRG1Q9Y653 693 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 C2CD3Q4AC94 2353 aa15.92■□□□□ 0.14
USP48-210ENST00000489108 IGHV5-51A0A0C4DH38 117 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 A6NL46 340 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 ZNF185O15231 689 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 LPOP22079 712 aaPredicted RBP15.91■□□□□ 0.14
USP48-210ENST00000489108 CAPZBP47756 277 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 SPINT3P49223 89 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 PPP1CAP62136 330 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 MAMLD1Q13495 774 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 TUBB3Q13509 450 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 HENMT1Q5T8I9 393 aaKnown RBP15.91■□□□□ 0.14
USP48-210ENST00000489108 RHOT1Q8IXI2 618 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP48-210ENST00000489108 SIDT2Q8NBJ9 832 aaKnown RBP15.91■□□□□ 0.14
USP48-210ENST00000489108 OR2AG1Q9H205 316 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 FAM83DQ9H4H8 585 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 ASF1BQ9NVP2 202 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 EPHA6Q9UF33 1036 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 POLQO75417 2590 aa15.91■□□□□ 0.14
USP48-210ENST00000489108 RNF8O76064 485 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 PRLP01236 227 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 PRF1P14222 555 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 ZNF135P52742 658 aaPredicted RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 SEPT7Q16181 437 aaKnown RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 DPCR1Q3MIW9 517 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 PLA2G4EQ3MJ16 856 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 PLEKHN1Q494U1 663 aaPredicted RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 ZRANB3Q5FWF4 1079 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 CYB5D1Q6P9G0 228 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 CRTC3Q6UUV7 619 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 TMCO3Q6UWJ1 677 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 CERS6Q6ZMG9 384 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 PSTKQ8IV42 348 aaKnown RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 RAVER1Q8IY67 606 aaKnown RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 CISD2Q8N5K1 135 aaKnown RBP15.9■□□□□ 0.14
USP48-210ENST00000489108 ATPAF2Q8N5M1 289 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 ADAMTS17Q8TE56 1095 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 MR1Q95460 341 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 RANBP9Q96S59 729 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 ZWILCHQ9H900 591 aa15.9■□□□□ 0.14
USP48-210ENST00000489108 SLC40A1Q9NP59 571 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms