RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
HDAC6-232ENST00000489053 SPO11Q9Y5K1 396 aa9.03□□□□□ -0.96
HDAC6-232ENST00000489053 OAS3Q9Y6K5 1087 aaKnown RBP9.03□□□□□ -0.96
HDAC6-232ENST00000489053 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
HDAC6-232ENST00000489053 KIR2DS5A0A0G2JLQ3 304 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 A0A0G2JNG1 304 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 LOC285095A0A1B0GVY8 99 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 KIR2DS3K7RE56 304 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 NTN3O00634 580 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ARHGAP6O43182 974 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 NUAK1O60285 661 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 VIPP01282 170 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CCDC175P0C221 793 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ZNF8P17098 575 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 BPIP17213 487 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 LPOP22079 712 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 IDSP22304 550 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 PSMB4P28070 264 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CCKBRP32239 447 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 UGT1A5P35504 534 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CHRNA4P43681 627 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 TMPRSS3P57727 454 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CXADRP78310 365 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 GPLD1P80108 840 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 HHEXQ03014 270 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 SEPT6Q14141 434 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 KIR2DS5Q14953 304 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 SEPT7Q16181 437 aaKnown RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 LONRF2Q1L5Z9 754 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ANKRD20A2Q5SQ80 823 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ANKRD20A1Q5TYW2 823 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ANKRD20A3Q5VUR7 823 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 KDELC1Q6UW63 502 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 B3GNT8Q7Z7M8 397 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 FAM71DQ8N9W8 422 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CCDC110Q8TBZ0 833 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 SLC37A2Q8TED4 501 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 PATE1Q8WXA2 126 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ALG3Q92685 438 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 CXorf40BQ96DE9 158 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 OXNAD1Q96HP4 312 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 SLC46A1Q96NT5 459 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 FCRL3Q96P31 734 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 TBL1YQ9BQ87 522 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 DPH1Q9BZG8 443 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 C10orf88Q9H8K7 445 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 RDH14Q9HBH5 336 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 ATXN10Q9UBB4 475 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 TRIM10Q9UDY6 481 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 FEZ2Q9UHY8 353 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-232ENST00000489053 IGSF10Q6WRI0 2623 aa9.02□□□□□ -0.97
HDAC6-232ENST00000489053 A0A1W2PQM1 296 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 C5orf60A6NFR6 353 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 AURKAO14965 403 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 PSMD3O43242 534 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 BUD23O43709 281 aaKnown RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 TLX3O43711 291 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 DNAJC6O75061 913 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 MTX2O75431 263 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 AGTP01019 485 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 IFNB1P01574 187 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 FUCA1P04066 466 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 CAPNS1P04632 268 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 F3P13726 295 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ZNF7P17097 686 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ITPKBP27987 946 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 HADHAP40939 763 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 SNAP47Q5SQN1 464 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ZNF648Q5T619 568 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 NKAIN2Q5VXU1 208 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 AADACL2Q6P093 401 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ZNF449Q6P9G9 518 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 SFTPA2Q8IWL1 248 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 SPACA3Q8IXA5 215 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 NAGSQ8N159 534 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 CCDC89Q8N998 374 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 AGBL5Q8NDL9 886 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 NCSTNQ92542 709 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ULK4Q96C45 1275 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 ZNF514Q96K75 400 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 VPS35Q96QK1 796 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 APOL2Q9BQE5 337 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 TIMM29Q9BSF4 260 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 EPB41L1Q9H4G0 881 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 LRRC40Q9H9A6 602 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 SARS2Q9NP81 518 aaKnown RBP9.01□□□□□ -0.97
HDAC6-232ENST00000489053 LZTFL1Q9NQ48 299 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 CRLS1Q9UJA2 301 aa9.01□□□□□ -0.97
HDAC6-232ENST00000489053 CNOT6Q9ULM6 557 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms