RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 AVL9Q8NBF6 648 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 PBKQ96KB5 322 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 TMEM74Q96NL1 305 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 C19orf43Q9BQ61 176 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 STRADBQ9C0K7 418 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF106Q9H2Y7 1883 aaKnown RBP14.11□□□□□ -0.15
BRCA1-218ENST00000489037 OSGEPL1Q9H4B0 414 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 KLC4Q9NSK0 619 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 PAK5Q9P286 719 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 DKK4Q9UBT3 224 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 KCNK6Q9Y257 313 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 DRG1Q9Y295 367 aaKnown RBP14.11□□□□□ -0.15
BRCA1-218ENST00000489037 AKAP13Q12802 2813 aa14.11□□□□□ -0.15
BRCA1-218ENST00000489037 TRBV23OR9-2A0A075B6M9 112 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 OR5K4A6NMS3 321 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 NTN3O00634 580 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-218ENST00000489037 CHUKO15111 745 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 KIF5CO60282 957 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A9O60656 530 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 KCNJ13O60928 360 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 MTX2O75431 263 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 PRAMEF1O95521 474 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF7P17097 686 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A6P19224 532 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 MSH3P20585 1137 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A1P22309 533 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A4P22310 534 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 ALDH4A1P30038 563 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 AKT1P31749 480 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 CXCR5P32302 372 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A3P35503 534 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A5P35504 534 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 GPR3P46089 330 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 CLCNKAP51800 687 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 LAMB3Q13751 1172 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SEPT6Q14141 434 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 DENND5AQ6IQ26 1287 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 DRICH1Q6PGQ1 229 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SPRED1Q7Z699 444 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SLC9B2Q86UD5 537 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 C17orf82Q86X59 251 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-218ENST00000489037 PROSER1Q86XN7 944 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 TRAPPC5Q8IUR0 188 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SFTPA2Q8IWL1 248 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SH3KBP1Q96B97 665 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 NAP1L3Q99457 506 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-218ENST00000489037 TIMM29Q9BSF4 260 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 ASB8Q9H765 288 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A7Q9HAW7 530 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A10Q9HAW8 530 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 UGT1A8Q9HAW9 530 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 ETNK1Q9HBU6 452 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 FKBPLQ9UIM3 349 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 RABGEF1Q9UJ41 708 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 CRLS1Q9UJA2 301 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 PCDHB1Q9Y5F3 818 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 SLC30A1Q9Y6M5 507 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 APC2O95996 2303 aa14.1□□□□□ -0.15
BRCA1-218ENST00000489037 KIR2DS5A0A0G2JLQ3 304 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 A0A0G2JNG1 304 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 KIR2DS3K7RE56 304 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 SRP72O76094 671 aaKnown RBP14.09□□□□□ -0.15
BRCA1-218ENST00000489037 RALBP11234 206 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 TPH1P17752 444 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ITGALP20701 1170 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 INHBCP55103 352 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 TMPRSS15P98073 1019 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 CDH17Q12864 832 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 PTPRCAPQ14761 206 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 KIR2DS5Q14953 304 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 CLPPQ16740 277 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-218ENST00000489037 PLA2G4EQ3MJ16 856 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 MAP9Q49MG5 647 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 PIM3Q86V86 326 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 DDHD1Q8NEL9 900 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 HEXDCQ8WVB3 486 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 PATE1Q8WXA2 126 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ULK4Q96C45 1275 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 AHCYL2Q96HN2 611 aaKnown RBP14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ZNF514Q96K75 400 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-218ENST00000489037 SLC38A3Q99624 504 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ZMYND15Q9H091 742 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 POLR1BQ9H9Y6 1135 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 RAB6BQ9NRW1 208 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 SMOXQ9NWM0 555 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 TBC1D29Q9UFV1 150 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 KCTD3Q9Y597 815 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ENTPD2Q9Y5L3 495 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 ST14Q9Y5Y6 855 aa14.09□□□□□ -0.15
BRCA1-218ENST00000489037 PIKFYVEQ9Y2I7 2098 aa14.08□□□□□ -0.15
BRCA1-218ENST00000489037 CCDC187A0A096LP49 1063 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 A0A1W2PQM1 296 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 PDZK1P1A8MUH7 402 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 D6RAR5 112 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 F3P13726 295 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 IDSP22304 550 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 RBMS1P29558 406 aaKnown RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 FASLGP48023 281 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 LSSP48449 732 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms