RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TWF1Q12792 350 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 NFYCQ13952 458 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 CYP51A1Q16850 503 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 CTSL3PQ5NE16 218 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 ZNF786Q8N393 782 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 OR10Q1Q8NGQ4 319 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 OR2T34Q8NGX1 318 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 OR2T3Q8NH03 318 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 RHEBL1Q8TAI7 183 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 LINGO1Q96FE5 620 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 PPM1MQ96MI6 270 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 MGME1Q9BQP7 344 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 HGH1Q9BTY7 390 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 RNF38Q9H0F5 515 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 PLK2Q9NYY3 685 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 COMMD3-BMI1R4GMX3 469 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 SYN3O14994 580 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 RSL1D1O76021 490 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 NDST3O95803 873 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 EPOP01588 193 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 SLC10A3P09131 477 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 OGNP20774 298 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 ZFP36L2P47974 494 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 FCGRTP55899 365 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 MTPNP58546 118 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 FAM189BP81408 668 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 SGO1Q5FBB7 561 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 DNAJC14Q6Y2X3 702 aaPredicted RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 ABI1Q8IZP0 508 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 EID2BQ96D98 161 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 DGCR14Q96DF8 476 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 UHRF1Q96T88 793 aaPredicted RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 EPB41L1Q9H4G0 881 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 TFB2MQ9H5Q4 396 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 SLC52A3Q9NQ40 469 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 CD274Q9NZQ7 290 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 UTS2RQ9UKP6 389 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 CNOT11Q9UKZ1 510 aaKnown RBP12.57□□□□□ -0.4
CLIC4-202ENST00000488683 RNF103-CHMP3A0A140T963 221 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 DHRS12A0PJE2 317 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 H3BNC9 293 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 FFAR3O14843 346 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 GPR42O15529 346 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 KERAO60938 352 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 RTN3O95197 1032 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MZF1P28698 734 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 ACLYP53396 1101 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 CTBSQ01459 385 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 USP41Q3LFD5 358 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 ALG1LQ6GMV1 187 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 RAB44Q7Z6P3 723 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 DUS3LQ96G46 650 aaKnown RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 CCDC68Q9H2F9 335 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 SCUBE2Q9NQ36 999 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 NLE1Q9NVX2 485 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 THEGQ9P2T0 379 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 COMMD10Q9Y6G5 202 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 BNIP3LO60238 219 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 B3GALT4O96024 378 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 LBPP18428 481 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 HSPA13P48723 471 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 IST1P53990 364 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 RING1Q06587 406 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 TRAF2Q12933 501 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 RNF219Q5W0B1 726 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 LETMD1Q6P1Q0 360 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 FNDC5Q8NAU1 212 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 PEX13Q92968 403 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 ROPN1LQ96C74 230 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 SDR39U1Q9NRG7 319 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 FARSBQ9NSD9 589 aaKnown RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 MRGBPQ9NV56 204 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 UBA2Q9UBT2 640 aaPredicted RBP12.56□□□□□ -0.4
CLIC4-202ENST00000488683 RAI2Q9Y5P3 530 aa12.56□□□□□ -0.4
CLIC4-202ENST00000488683 EI24O14681 340 aa12.55□□□□□ -0.4
CLIC4-202ENST00000488683 TSPAN12O95859 305 aa12.55□□□□□ -0.4
CLIC4-202ENST00000488683 C1RP00736 705 aa12.55□□□□□ -0.4
CLIC4-202ENST00000488683 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
CLIC4-202ENST00000488683 GSK3BP49841 420 aa12.55□□□□□ -0.4
CLIC4-202ENST00000488683 OXCT1P55809 520 aa12.55□□□□□ -0.4
CLIC4-202ENST00000488683 OR4D2P58180 307 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms