RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CCDC190Q86UF4 302 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 KBTBD6Q86V97 674 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 NRROSQ86YC3 692 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SCYL3Q8IZE3 742 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 IL17RCQ8NAC3 791 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 OR1J2Q8NGS2 313 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 GSDMBQ8TAX9 411 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 FEM1CQ96JP0 617 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 OR1F2PQ96R84 312 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 PAFAH2Q99487 392 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SEMA3CQ99985 751 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 HRH4Q9H3N8 390 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 ARHGEF38Q9NXL2 777 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 C1RLQ9NZP8 487 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 MALT1Q9UDY8 824 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 STK39Q9UEW8 545 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 B3GALT5Q9Y2C3 310 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 SNX8Q9Y5X2 465 aa3.2□□□□□ -1.9
CD46-215ENST00000488596 IGLV5-37A0A075B6J1 123 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 A0A1W2PR77 199 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 KANSL1LA0AUZ9 987 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 EIF4E1BA6NMX2 242 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 FAM90A26D6RGX4 464 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 NTN3O00634 580 aaPredicted RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 ANKRD28O15084 1053 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 MITFO75030 526 aaPredicted RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 DAB1O75553 588 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 RSL1D1O76021 490 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE7O76087 117 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE12FP0CL80 117 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE12GP0CL81 117 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE12IP0CL82 117 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 FCGR1AP12314 374 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SAT1P21673 171 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CORO1AP31146 461 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 MMP14P50281 582 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PEX5P50542 639 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GPR143P51810 404 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CLDN20P56880 219 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CD81P60033 236 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 ISL1P61371 349 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 TUBA1BP68363 451 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 ECT2LQ008S8 904 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SLC20A2Q08357 652 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SPOCK1Q08629 439 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 LRMPQ12912 555 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 DLG1Q12959 904 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE1Q13065 139 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 GAGE4Q13068 117 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 KCNC3Q14003 757 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 BECN1Q14457 450 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PCLAFQ15004 111 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CALCRLQ16602 461 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 DECR1Q16698 335 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CCDC96Q2M329 555 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 BRAT1Q6PJG6 821 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PRSS57Q6UWY2 283 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SATL1Q86VE3 508 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CEP97Q8IW35 865 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 ODF3L1Q8IXM7 274 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 TMTC2Q8N394 836 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 NME8Q8N427 588 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SPATA22Q8NHS9 363 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SLC20A1Q8WUM9 679 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SLC44A1Q8WWI5 657 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 LRRC59Q96AG4 307 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 SLC22A18Q96BI1 424 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 NUDCD1Q96RS6 583 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 LRRC4Q9HBW1 653 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 CLIC5Q9NZA1 410 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 SEC63Q9UGP8 760 aaKnown RBP3.19□□□□□ -1.9
CD46-215ENST00000488596 FBXL2Q9UKC9 423 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PADI1Q9ULC6 663 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PLAGL1Q9UM63 463 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 ICAM5Q9UMF0 924 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 PRAG1Q86YV5 1406 aa3.19□□□□□ -1.9
CD46-215ENST00000488596 A0A0G2JPF8 293 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 LRRC72A6NJI9 287 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HNRNPCL3B7ZW38 293 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ZNF587BE7ETH6 402 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HS3ST1O14792 307 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 SMAD9O15198 467 aaKnown RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 LINC01565O15544 149 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 KCNN4O15554 427 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 PAPSS1O43252 624 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 TMCC2O75069 709 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 RFPL2O75678 378 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ZWINTO95229 277 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 PMS2P2O95744 297 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 CENPBP07199 599 aaPredicted RBP3.18□□□□□ -1.9
CD46-215ENST00000488596 LINC00271P0C7V0 271 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 HNRNPCL4P0DMR1 293 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 ACTN1P12814 892 aa3.18□□□□□ -1.9
CD46-215ENST00000488596 MYOD1P15172 320 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms