RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SPAG4Q9NPE6 437 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 POLE4Q9NR33 117 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TMEM181Q9P2C4 612 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATPIF1Q9UII2 106 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRPC5Q9UL62 973 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 VANGL2Q9ULK5 521 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CAB39Q9Y376 341 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHGB1Q9Y5G3 927 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DGKBQ9Y6T7 804 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ROBO1Q9Y6N7 1651 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CNTNAP1P78357 1384 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 A0A0X1KG70 313 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 C16orf96A6NNT2 1141 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CENPXA8MT69 81 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 KPNA7A9QM74 516 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 H0YIN7 160 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TPP1O14773 563 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CFLARO15519 480 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX2O60749 519 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DAB1O75553 588 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX4O95219 450 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 HSPA4LO95757 839 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 GPIP06744 558 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PGK2P07205 417 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ADRB2P07550 413 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 MYL3P08590 195 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 HTR1AP08908 422 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCNAP12004 261 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATP6V1B2P21281 511 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 BDNFP23560 247 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 FASP25445 335 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ARL1P40616 181 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 RPS9P46781 194 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 HCAR3P49019 387 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRIM2P49643 509 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAPK10P53779 464 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 GFRA1P56159 465 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 GJA9P57773 515 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 MRPS15P82914 257 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC25A11Q02978 314 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF543Q08ER8 600 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 INCA1Q0VD86 236 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 IKZF1Q13422 519 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SEMA5AQ13591 1074 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PIGHQ14442 188 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NFIXQ14938 502 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ACOX1Q15067 660 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PDK2Q15119 407 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOMO1Q15155 1222 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NKPD1Q17RQ9 610 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 GEN1Q17RS7 908 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DPY19L1Q2PZI1 675 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TYSND1Q2T9J0 566 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TM4SF20Q53R12 229 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ODR4Q5SWX8 454 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 MROH9Q5TGP6 573 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 STEAP3Q658P3 488 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SEL1L3Q68CR1 1132 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PTAR1Q7Z6K3 402 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DHFR2Q86XF0 187 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 UBQLNLQ8IYU4 475 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ADGRG5Q8IZF4 528 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 OFCC1Q8IZS5 231 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ABRAQ8N0Z2 381 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PELI3Q8N2H9 469 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SYNPOQ8N3V7 929 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DCLK2Q8N568 766 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCDC185Q8N715 623 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC44A5Q8NCS7 719 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM156AQ8NDB6 213 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PAPD5Q8NDF8 572 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR7A2PQ8NGA2 310 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR5H6Q8NGV6 325 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR10Z1Q8NGY1 313 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CANT1Q8WVQ1 401 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CYGBQ8WWM9 190 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 HTRA1Q92743 480 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NINJ1Q92982 152 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 REXO5Q96IC2 774 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ST6GAL2Q96JF0 529 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CDHR1Q96JP9 859 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM84BQ96KN1 310 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 CEP170P1Q96L14 293 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 RDH12Q96NR8 316 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF300Q96RE9 604 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 EIF2AK1Q9BQI3 630 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 UQCC2Q9BRT2 126 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 TARS2Q9BW92 718 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 MRPL9Q9BYD2 267 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM126AQ9BYI3 521 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLIRPQ9GZT3 109 aaKnown RBP4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 C2orf40Q9H1Z8 148 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NKX2-4Q9H2Z4 354 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 DPEP3Q9H4B8 488 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 NARFLQ9H6Q4 476 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 SPC25Q9HBM1 224 aa4.73□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAVER2Q9HCJ3 691 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms