RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 CHUKO15111 745 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 MTX2O75431 263 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 STK10O94804 968 aaKnown RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 ITGA2BP08514 1039 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 PSMB4P28070 264 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 ADRA1AP35348 466 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 KLF1Q13351 362 aaPredicted RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 SQSTM1Q13501 440 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 PRPSAP1Q14558 356 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 CLPPQ16740 277 aaPredicted RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 MAP9Q49MG5 647 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 KHDC1Q4VXA5 237 aaKnown RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 PHF19Q5T6S3 580 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 NKAIN2Q5VXU1 208 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 ZDHHC20Q5W0Z9 365 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 RANBP10Q6VN20 620 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 ZNF574Q6ZN55 896 aaPredicted RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 RNF10Q8N5U6 811 aaKnown RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 CCDC110Q8TBZ0 833 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 KCNE4Q8WWG9 221 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 VPS35Q96QK1 796 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 SLC38A3Q99624 504 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 CMKLR1Q99788 373 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 PRORYQ9H606 182 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 KLC4Q9NSK0 619 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 KCNK4Q9NYG8 393 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 SLC23A2Q9UGH3 650 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 AAR2Q9Y312 384 aaKnown RBP11.31□□□□□ -0.6
SPEN-205ENST00000487496 LOXL2Q9Y4K0 774 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 CAPN6Q9Y6Q1 641 aa11.31□□□□□ -0.6
SPEN-205ENST00000487496 IGHV5-10-1A0A0J9YXX1 117 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 GOLGA6L9A6NEM1 432 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 AGRPO00253 132 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 BUD23O43709 281 aaKnown RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 VEGFDO43915 354 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A9O60656 530 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 SNX2O60749 519 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 PPFIA2O75334 1257 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CDK14O94921 469 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 JMJD7P0C870 316 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 F3P13726 295 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A6P19224 532 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 ITIH1P19827 911 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A1P22309 533 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A4P22310 534 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A3P35503 534 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 SPAM1P38567 509 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CLCNKAP51800 687 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 GSDMDP57764 484 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 GPLD1P80108 840 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CFHR1Q03591 330 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 TMEM115Q12893 351 aaPredicted RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 OLIG2Q13516 323 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 PTPRCAPQ14761 206 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CHRNA6Q15825 494 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CRTC3Q6UUV7 619 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 FAM151BQ6UXP7 276 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 LRRTM4Q86VH4 590 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 ZNF761Q86XN6 746 aaPredicted RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 ZNF547Q8IVP9 402 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 TTC13Q8NBP0 860 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 TMEM159Q96B96 161 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 HES6Q96HZ4 224 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 APOL2Q9BQE5 337 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 DPH1Q9BZG8 443 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A7Q9HAW7 530 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A10Q9HAW8 530 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 UGT1A8Q9HAW9 530 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 SARS2Q9NP81 518 aaKnown RBP11.3□□□□□ -0.6
SPEN-205ENST00000487496 PRDM8Q9NQV8 689 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPEN-205ENST00000487496 PISDQ9UG56 409 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 PKP3Q9Y446 797 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 PCDHGA7Q9Y5G6 932 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
SPEN-205ENST00000487496 KIR2DS5A0A0G2JLQ3 304 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 A0A0G2JNG1 304 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 GLYATL1P3A0A0U1RQE8 302 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 TCRBV7S2A1N4TA0A589 114 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 C5orf60A6NFR6 353 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 OR5K4A6NMS3 321 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 KIR2DS3K7RE56 304 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 KMOO15229 486 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 STX7O15400 261 aaKnown RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 KLK10O43240 276 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 ZNF189O75820 626 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 SLC2A4P14672 509 aa11.29□□□□□ -0.6
SPEN-205ENST00000487496 ZNF7P17097 686 aaPredicted RBP11.29□□□□□ -0.6
SPEN-205ENST00000487496 SLC5A2P31639 672 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms