RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CDC16Q13042 620 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 REP15Q6BDI9 236 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 RANBP10Q6VN20 620 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 C1orf74Q96LT6 269 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 KLHL32Q96NJ5 620 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 AKTIPQ9H8T0 292 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 PCDH12Q9NPG4 1184 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF840PA6NDX5 716 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 NPHS1O60500 1241 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 NBNO60934 754 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 SORBS2O94875 1100 aaKnown RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 HOXD8P13378 290 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CACNG1Q06432 222 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 HIST2H2ACQ16777 129 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 HIST2H2AA3Q6FI13 130 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 IMPDH1P20839 514 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 MAPK8P45983 427 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 AQP4P55087 323 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 CDKN2DP55273 166 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 RAET1GQ6H3X3 334 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 MAGED4Q96JG8 741 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 KCNK13Q9HB14 408 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 LEF1Q9UJU2 399 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 PDZK1P1A8MUH7 402 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 AXIN1O15169 862 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 IDO1P14902 403 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 POLD2P49005 469 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 PER2O15055 1255 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 VPS4BO75351 444 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 SYN1P17600 705 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 AOC1P19801 751 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 STK19P49842 368 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 HERVK_113P63132 956 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 C6orf52Q5T4I8 152 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 Q6ZVU0 165 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 RTN4RL1Q86UN2 441 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ANKRD46Q86W74 232 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 TPD52L3Q96J77 140 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 APOLD1Q96LR9 279 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF490Q9ULM2 529 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-216ENST00000486741 DHRS12A0PJE2 317 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 GPR39O43194 453 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 STC2O76061 302 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 SPAM1P38567 509 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 HSPA13P48723 471 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 RPIAP49247 311 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ADAM17P78536 824 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 HMGCS1Q01581 520 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 PTPRRQ15256 657 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 AAGABQ6PD74 315 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 TMC5Q6UXY8 1006 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CHST9Q7L1S5 443 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 DYRK1BQ9Y463 629 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 SCAMP1O15126 338 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 MAGEA6P43360 314 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 STC1P52823 247 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CHRNA6Q15825 494 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms