RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 NOL6Q9H6R4 1146 aaKnown RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 YIPF1Q9Y548 306 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 OTCP00480 354 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 WASP42768 502 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 SLC1A2P43004 574 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 GJA8P48165 433 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 ERVK-21P61565 698 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 MAPK11Q15759 364 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 TXNDC11Q6PKC3 985 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 HEXDCQ8WVB3 486 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 SLC7A6OSQ96CW6 309 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 NMUR1Q9HB89 426 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 OR51F1A6NGY5 319 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 SLC7A4O43246 635 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 CHRNA1P02708 482 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ACVRL1P37023 503 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 GRIA3P42263 894 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 HTRA3P83110 453 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 GPR17Q13304 367 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 KIAA0930Q6ICG6 404 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 RELL1Q8IUW5 271 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 RORBQ92753 470 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 C8orf48Q96LL4 319 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TRPC4Q9UBN4 977 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 SNX6Q9UNH7 406 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 SCML2Q9UQR0 700 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 HNRNPCL2B2RXH8 293 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 PTGESO14684 152 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF623O75123 536 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 CNOT3O75175 753 aaKnown RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ALOX5P09917 674 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ZYG11AQ6WRX3 759 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 CHST9Q7L1S5 443 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 C11orf74Q86VG3 221 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 IGDCC3Q8IVU1 814 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF781Q8N8C0 355 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 CYP2S1Q96SQ9 504 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 PTPN18Q99952 460 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 WDR37Q9Y2I8 494 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TBC1D30Q9Y2I9 924 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TIMM22Q9Y584 194 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 A0A088AWK7 358 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 FAM72CH0Y354 149 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 PRAMEF1O95521 474 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF10P21506 573 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 KRT20P35900 424 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 MRPL28Q13084 256 aaKnown RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 PRKG2Q13237 762 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 RALGPS1Q5JS13 557 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ADGRF1Q5T601 910 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 FAM72AQ5TYM5 149 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TXNDC8Q6A555 127 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 FAM72DQ6L9T8 149 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 KLHDC10Q6PID8 442 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 FAM72BQ86X60 149 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF614Q8N883 585 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 CACNA2D2Q9NY47 1150 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 TEKT2Q9UIF3 430 aa10.95□□□□□ -0.66
HDAC6-228ENST00000486227 MTF2Q9Y483 593 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-228ENST00000486227 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 KLF11O14901 512 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PER2O15055 1255 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 BMP10O95393 424 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 FTH1P02794 183 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 NTRK1P04629 796 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 GJA1P17302 382 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 NELFEP18615 380 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 POLD2P49005 469 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SEMG2Q02383 582 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF252P-AS1Q0IIN9 211 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ADGRE1Q14246 886 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 STK32CQ86UX6 486 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ERI1Q8IV48 349 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 OR13C4Q8NGS5 318 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 SPPL2AQ8TCT8 520 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ATL1Q8WXF7 558 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 REPS1Q96D71 796 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PTCD3Q96EY7 689 aaKnown RBP10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PPP3R2Q96LZ3 170 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 NPAS2Q99743 824 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 INVSQ9Y283 1065 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 ARL5AQ9Y689 179 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 LAMA4Q16363 1823 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PRNPP04156 253 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 COX7A2P14406 83 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 GALNT2Q10471 571 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 MAPKAPK3Q16644 382 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 CLEC6AQ6EIG7 209 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 CERS6Q6ZMG9 384 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 PDSS2Q86YH6 399 aa10.94□□□□□ -0.66
HDAC6-228ENST00000486227 DSELQ8IZU8 1212 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms