RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 COX14Q96I36 57 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 FMO2Q99518 471 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 COPS8Q99627 209 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 OR2AG1Q9H205 316 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
NUP50-216ENST00000486184 TRIM39Q9HCM9 518 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 ARFGAP3Q9NP61 516 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PARD6AQ9NPB6 346 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
NUP50-216ENST00000486184 TMEM98Q9Y2Y6 226 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
NUP50-216ENST00000486184 F8W8V4 182 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 GPR39O43194 453 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 MTX2O75431 263 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CDK14O94921 469 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CSF2P04141 144 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CEACAM5P06731 702 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 IVLP07476 585 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 NME1P15531 152 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 PSMA3P25788 255 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 ACRV1P26436 265 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 FOXN2P32314 431 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 GNPDA1P46926 289 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 TTPAP49638 278 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 HK3P52790 923 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 IL9RQ01113 521 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 BNC1Q01954 994 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 TMEM115Q12893 351 aaPredicted RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 CRYMQ14894 314 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 TRADDQ15628 312 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 ALG11Q2TAA5 492 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 INAVAQ3KP66 663 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 PRAMEF14Q5SWL7 426 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 PSAPL1Q6NUJ1 521 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 ZDHHC24Q6UX98 284 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CERS6Q6ZMG9 384 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 TMEM135Q86UB9 458 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 SERPINA9Q86WD7 417 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CALML6Q8TD86 181 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 OR1E3Q8WZA6 343 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 UBXN4Q92575 508 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 PDXPQ96GD0 296 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 FGF22Q9HCT0 170 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 MRPL40Q9NQ50 206 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 C20orf96Q9NUD7 363 aaPredicted RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 ZDHHC3Q9NYG2 299 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 ATXN10Q9UBB4 475 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 SPASTQ9UBP0 616 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 ZNHIT2Q9UHR6 403 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 CNOT6Q9ULM6 557 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 SUFUQ9UMX1 484 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 DOLKQ9UPQ8 538 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 SLC17A4Q9Y2C5 497 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 GPSM3Q9Y4H4 160 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.27□□□□□ -0.61
NUP50-216ENST00000486184 TEX264Q9Y6I9 313 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 FAM169AQ9Y6X4 670 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.61
NUP50-216ENST00000486184 A0A1B0GTQ1 180 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 NEMP2A6NFY4 417 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 E7ESA3 106 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 TP73O15350 636 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 NUAK1O60285 661 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 SDC3O75056 442 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 NDUFS3O75489 264 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 EPHA8P29322 1005 aaPredicted RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 POLD2P49005 469 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ILF3Q12906 894 aaKnown RBP eCLIP11.26□□□□□ -0.61
NUP50-216ENST00000486184 ITIH4Q14624 930 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ELOCQ15369 112 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 SMAD1Q15797 465 aaKnown RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 UAP1L1Q3KQV9 507 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 PRRT3Q5FWE3 981 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ZNF648Q5T619 568 aaPredicted RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 CRTC3Q6UUV7 619 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ADGRG6Q86SQ4 1221 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 KCNMB4Q86W47 210 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 TRAPPC5Q8IUR0 188 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 KIAA2013Q8IYS2 634 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 RBFAQ8N0V3 343 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 AGGF1Q8N302 714 aaeCLIP11.26□□□□□ -0.61
NUP50-216ENST00000486184 FSTL5Q8N475 847 aaPredicted RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 OR2I1PQ8NGU4 316 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 LMX1AQ8TE12 382 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ZNF514Q96K75 400 aaPredicted RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 OR2M4Q96R27 311 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 TRIM56Q9BRZ2 755 aaKnown RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 IL21RQ9HBE5 538 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms