RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CPNE6O95741 557 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 EPOP01588 193 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 HLA-DPA1P20036 260 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 PTPN7P35236 360 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 HMGCLP35914 325 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 MAPK9P45984 424 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 MAPK10P53779 464 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 DCDC1P59894 354 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 ERVPABLB-1P60509 514 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 SEPT7Q16181 437 aaKnown RBP17.45■□□□□ 0.38
COL6A1-204ENST00000486023 INSCQ1MX18 579 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 C17orf82Q86X59 251 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-204ENST00000486023 SPACA3Q8IXA5 215 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 TTC30BQ8N4P2 665 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 KCNE4Q8WWG9 221 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 PRR11Q96HE9 360 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-204ENST00000486023 AHCYL2Q96HN2 611 aaKnown RBP17.45■□□□□ 0.38
COL6A1-204ENST00000486023 TTC25Q96NG3 672 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 NUDT22Q9BRQ3 303 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 ASCL3Q9NQ33 180 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 LOXL2Q9Y4K0 774 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 CAPN6Q9Y6Q1 641 aa17.45■□□□□ 0.38
COL6A1-204ENST00000486023 MIF4GDA9UHW6 222 aaKnown RBP17.44■□□□□ 0.38
COL6A1-204ENST00000486023 STX7O15400 261 aaKnown RBP17.44■□□□□ 0.38
COL6A1-204ENST00000486023 GPR39O43194 453 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 HOXB3P14651 431 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-204ENST00000486023 ITIH1P19827 911 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 CD1CP29017 333 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 SPAM1P38567 509 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 GTF2H3Q13889 308 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 CHRNA6Q15825 494 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 ARHGEF18Q6ZSZ5 1173 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 FAM71DQ8N9W8 422 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 RCBTB1Q8NDN9 531 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 LIN37Q96GY3 246 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-204ENST00000486023 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 IL26Q9NPH9 171 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 HACD3Q9P035 362 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 SLC23A2Q9UGH3 650 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 AAR2Q9Y312 384 aaKnown RBP17.44■□□□□ 0.38
COL6A1-204ENST00000486023 PCDHGA8Q9Y5G5 932 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 ADGRG1Q9Y653 693 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
COL6A1-204ENST00000486023 GLYATL1P3A0A0U1RQE8 302 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 TCRBV7S2A1N4TA0A589 114 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 PDZK1P1A8MUH7 402 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 DXOO77932 396 aaKnown RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 GPR3P46089 330 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 GSDMDP57764 484 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 CXADRP78310 365 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 TMPRSS15P98073 1019 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 HHEXQ03014 270 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 TMEM115Q12893 351 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 KHDC1Q4VXA5 237 aaKnown RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 SNAP47Q5SQN1 464 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 PDPK2PQ6A1A2 396 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 IYDQ6PHW0 289 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 LRRTM4Q86VH4 590 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 TRAPPC5Q8IUR0 188 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 SFRP1Q8N474 314 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 SPATA13Q96N96 652 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 PLEKHG4BQ96PX9 1271 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 CMKLR1Q99788 373 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 STN1Q9H668 368 aaKnown RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 AKAP7Q9P0M2 348 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 IL17CQ9P0M4 197 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 TMPRSS11EQ9UL52 423 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 R3HDM2Q9Y2K5 976 aaKnown RBP17.43■□□□□ 0.38
COL6A1-204ENST00000486023 KCTD3Q9Y597 815 aa17.43■□□□□ 0.38
COL6A1-204ENST00000486023 IGHV1OR21-1A0A087WYE8 117 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 A8MU76 341 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 KMOO15229 486 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 KRT86O43790 486 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 RPL10P27635 214 aaKnown RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 CCKBRP32239 447 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 TLE3Q04726 772 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 ZFP36L1Q07352 338 aaKnown RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 EIF3IQ13347 325 aaKnown RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 BROXQ5VW32 411 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 ZNF574Q6ZN55 896 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 ZNF438Q7Z4V0 828 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 SLC9B2Q86UD5 537 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 RNF10Q8N5U6 811 aaKnown RBP17.42■□□□□ 0.38
COL6A1-204ENST00000486023 TTC13Q8NBP0 860 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 OR4K2Q8NGD2 314 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 NCSTNQ92542 709 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 TBL1YQ9BQ87 522 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 TSGA10Q9BZW7 698 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 LZTFL1Q9NQ48 299 aa17.42■□□□□ 0.38
COL6A1-204ENST00000486023 C2orf81A6NN90 581 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 VEGFDO43915 354 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 ITGA2BP08514 1039 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 F3P13726 295 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 LPOP22079 712 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-204ENST00000486023 PBLDP30039 288 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-204ENST00000486023 SLC5A2P31639 672 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 AKT1P31749 480 aa17.41■□□□□ 0.38
COL6A1-204ENST00000486023 CA5AP35218 305 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms