RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 EFCAB8A8MWE9 144 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 YY2O15391 372 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 GRID2O43424 1007 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 RAD51CO43502 376 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 VEGFDO43915 354 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 NUAK1O60285 661 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CDK14O94921 469 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 PRSS56P0CW18 603 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 MYF5P13349 255 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 ACP5P13686 325 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 MSH3P20585 1137 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 ACTR1BP42025 376 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 ACTR1AP61163 376 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CTBSQ01459 385 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 DNAJC3Q13217 504 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 SMAD1Q15797 465 aaKnown RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CASC4Q6P4E1 433 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CHST15Q7LFX5 561 aaPredicted RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 TRAPPC5Q8IUR0 188 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 MPP5Q8N3R9 675 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 MCUQ8NE86 351 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 OR13J1Q8NGT2 312 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 OR6P1Q8NGX9 317 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 KIF18AQ8NI77 898 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 NAT14Q8WUY8 206 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 HDAC10Q969S8 669 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 ULK4Q96C45 1275 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 APOLD1Q96LR9 279 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 SERPINB12Q96P63 405 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 C19orf43Q9BQ61 176 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 ZCCHC2Q9C0B9 1178 aaKnown RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 RMI1Q9H9A7 625 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CHRAC1Q9NRG0 131 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 SMOXQ9NWM0 555 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 TRNAU1APQ9NX07 287 aaKnown RBP11.71□□□□□ -0.53
HPS4-214ENST00000485842 SAMD15Q9P1V8 674 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 GPR34Q9UPC5 381 aa11.71□□□□□ -0.53
HPS4-214ENST00000485842 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.54
HPS4-214ENST00000485842 ZFC3H1O60293 1989 aaKnown RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 PCNX2A6NKB5 2137 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 B4DGG1 531 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 H7C0S8 307 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 TPP1O14773 563 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 TNFSF14O43557 240 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 MLNP12872 115 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 NMBRP28336 390 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 CDKN1CP49918 316 aaPredicted RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 PRAMEP78395 509 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 CACNG1Q06432 222 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 TMEM115Q12893 351 aaPredicted RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 INSCQ1MX18 579 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 ZCCHC8Q6NZY4 707 aaKnown RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 AFTPHQ6ULP2 937 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 DET1Q7L5Y6 550 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 ZNF572Q7Z3I7 529 aaPredicted RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 PCGF5Q86SE9 256 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 LRRTM4Q86VH4 590 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 SERPINA9Q86WD7 417 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 NXPE1Q8N323 547 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 SDR16C5Q8N3Y7 309 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 KYQ8NBH2 561 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 FAM46DQ8NEK8 389 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.7□□□□□ -0.54
HPS4-214ENST00000485842 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
HPS4-214ENST00000485842 DCUN1D1Q96GG9 259 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 SNF8Q96H20 258 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 OSGEPL1Q9H4B0 414 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 TAAR2Q9P1P5 351 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 GULP1Q9UBP9 304 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 RIMKLBQ9ULI2 386 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 SOX13Q9UN79 622 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 KCNK6Q9Y257 313 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 ST14Q9Y5Y6 855 aa11.7□□□□□ -0.54
HPS4-214ENST00000485842 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 OR2AG2A6NM03 316 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 GPR89AB7ZAQ6 455 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 CFAP99D6REC4 459 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 KMOO15229 486 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
HPS4-214ENST00000485842 GOT2P00505 430 aaKnown RBP11.69□□□□□ -0.54
HPS4-214ENST00000485842 FTH1P19P0C7X4 201 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 GPR89BP0CG08 455 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 RALBP11234 206 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 CKMT2P17540 419 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 IVDP26440 423 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 PBLDP30039 288 aaPredicted RBP11.69□□□□□ -0.54
HPS4-214ENST00000485842 FOXN2P32314 431 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 CTSCP53634 463 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 ITGA8P53708 1063 aa11.69□□□□□ -0.54
HPS4-214ENST00000485842 ACVR1Q04771 509 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms