RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 HADHAP40939 763 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 OASLQ15646 514 aaKnown RBP12.36□□□□□ -0.43
PTCD1-205ENST00000485746 ISXQ2M1V0 245 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 MAP9Q49MG5 647 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 NAGSQ8N159 534 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 OR13C4Q8NGS5 318 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 PATE1Q8WXA2 126 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 GRAMD1AQ96CP6 724 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 AHCYL2Q96HN2 611 aaKnown RBP12.36□□□□□ -0.43
PTCD1-205ENST00000485746 PBKQ96KB5 322 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 EPB41L5Q9HCM4 733 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 PIH1D1Q9NWS0 290 aaKnown RBP12.36□□□□□ -0.43
PTCD1-205ENST00000485746 FKBPLQ9UIM3 349 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 CRLS1Q9UJA2 301 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 KCTD3Q9Y597 815 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
PTCD1-205ENST00000485746 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 PDZK1P1A8MUH7 402 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 SRP72O76094 671 aaKnown RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 RALBP11234 206 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ITGALP20701 1170 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 PBLDP30039 288 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 INHBCP55103 352 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 OR1D5P58170 312 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 GABREP78334 506 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 POU6F1Q14863 301 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 GPRC6AQ5T6X5 926 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 KCTD11Q693B1 232 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 TMEM220Q6QAJ8 160 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 TAS2R42Q7RTR8 314 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 SPRED1Q7Z699 444 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 PRUNE1Q86TP1 453 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 SLC9B2Q86UD5 537 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 TRIM48Q8IWZ4 208 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 REXO1L1PQ8IX06 675 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 SLC35F6Q8N357 371 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 OR52K1Q8NGK4 314 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 DTX3LQ8TDB6 740 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ULK4Q96C45 1275 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ATXN7L3BQ96GX2 97 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 TMEM74Q96NL1 305 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 SLC38A3Q99624 504 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ARNT2Q9HBZ2 717 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 KCNK4Q9NYG8 393 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 TBC1D29Q9UFV1 150 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 PCYT1BQ9Y5K3 369 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-205ENST00000485746 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
PTCD1-205ENST00000485746 OR5K4A6NMS3 321 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 AGRPO00253 132 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 MPOP05164 745 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 APRTP07741 180 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 ZSCAN5DPP0CG00 497 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 IDSP22304 550 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 RBMS1P29558 406 aaKnown RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 GPR3P46089 330 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 KCNJ1P48048 391 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 BASP1P80723 227 aaKnown RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 HHEXQ03014 270 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 CDH17Q12864 832 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 NFATC2Q13469 925 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 LAMB3Q13751 1172 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 RTP5Q14D33 572 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 KHDC1Q4VXA5 237 aaKnown RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 PHF19Q5T6S3 580 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 DRICH1Q6PGQ1 229 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 IYDQ6PHW0 289 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 C4orf22Q6V702 233 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 USP53Q70EK8 1073 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 DET1Q7L5Y6 550 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 PIM3Q86V86 326 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 SLC37A2Q8TED4 501 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 SH3KBP1Q96B97 665 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 FOXP3Q9BZS1 431 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 KCNF1Q9H3M0 494 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 FAM96AQ9H5X1 160 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 PRDM8Q9NQV8 689 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 AKAP7Q9P0M2 348 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-205ENST00000485746 TMPRSS11EQ9UL52 423 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 SATB2Q9UPW6 733 aa12.34□□□□□ -0.43
PTCD1-205ENST00000485746 ENTPD2Q9Y5L3 495 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms