RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A4D1N5 150 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 KDM4EB2RXH2 506 aaPredicted RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 IKBKBO14920 756 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 PRAMEF11O60813 436 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CREG1O75629 220 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 ZWINTO95229 277 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CELF2O95319 508 aaKnown RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CYC1P08574 325 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 THEGLP0DJG4 465 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 STMN1P16949 149 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 NR2F2P24468 414 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 HSPA4P34932 840 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 PCGF2P35227 344 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 AVPR1AP37288 418 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CDH13P55290 713 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TMPRSS3P57727 454 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TUBB4BP68371 445 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 NEDD9Q14511 834 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 MORF4L2Q15014 288 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SMTNL2Q2TAL5 461 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 C2orf76Q3KRA6 126 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 ATP13A5Q4VNC0 1218 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 FAM98BQ52LJ0 330 aaKnown RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 KRTCAP3Q53RY4 240 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 NHSL2Q5HYW2 709 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 PIK3CD-AS1Q5SR53 167 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 C6orf163Q5TEZ5 329 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SIGIRRQ6IA17 410 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF425Q6IV72 752 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 ANKRD54Q6NXT1 300 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TEX38Q6PEX7 206 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 PAPD4Q6PIY7 484 aaKnown RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CAMK1DQ8IU85 385 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 MFN1Q8IWA4 741 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 MB21D2Q8IYB1 491 aaPredicted RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SIX6OS1Q8N1H7 587 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SPATA6LQ8N4H0 392 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 C10orf53Q8N6V4 93 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 OR1J2Q8NGS2 313 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 ERGIC1Q969X5 290 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 CCDC47Q96A33 483 aaKnown RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SPACA9Q96E40 222 aaPredicted RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 RMDN2Q96LZ7 410 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 SH3GL2Q99962 352 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 FAM118BQ9BPY3 351 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM79Q9BSE2 394 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 MSTO1Q9BUK6 570 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM45AQ9NWC5 275 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 TAS2R14Q9NYV8 317 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 KLHL13Q9P2N7 655 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 STK39Q9UEW8 545 aa4.5□□□□□ -1.69
VPS13A-211ENST00000484581 DBNLQ9UJU6 430 aaKnown RBP4.5□□□□□ -1.69
VPS13A-211ENST00000484581 IGSF1Q8N6C5 1336 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 A0A0G2JK05 382 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 HTR3EA5X5Y0 456 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 STMND1H3BQB6 276 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 M0QZ24 198 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 PFKFB1P16118 471 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 PPP3CCP48454 512 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ADORA2A-AS1P86434 159 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ST3GAL1Q11201 340 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 GRIK2Q13002 908 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 PTPRCAPQ14761 206 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 SMU1Q2TAY7 513 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 DLK2Q6UY11 383 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF793Q6ZN11 406 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 LINC00696Q6ZRV3 163 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 CCDC190Q86UF4 302 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 FBXO39Q8N4B4 442 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ATAD1Q8NBU5 361 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 HM13Q8TCT9 377 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 TAS1R2Q8TE23 839 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 SLC35F5Q8WV83 523 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 DPF1Q92782 380 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 LRRC3BQ96PB8 259 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 NEK1Q96PY6 1258 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 SMC6Q96SB8 1091 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 DDOQ99489 341 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM39BQ9GZU3 492 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 MMADHCQ9H3L0 296 aaPredicted RBP4.49□□□□□ -1.69
VPS13A-211ENST00000484581 CHMP1AQ9HD42 196 aaPredicted RBP4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ACSS1Q9NUB1 689 aaPredicted RBP4.49□□□□□ -1.69
VPS13A-211ENST00000484581 TRMT1Q9NXH9 659 aaKnown RBP4.49□□□□□ -1.69
VPS13A-211ENST00000484581 ACSL5Q9ULC5 683 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 PCDHGA5Q9Y5G8 931 aa4.49□□□□□ -1.69
VPS13A-211ENST00000484581 GAGE12JA6NER3 117 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 EIF4E1BA6NMX2 242 aaKnown RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 DDX39AO00148 427 aaKnown RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 DNM1LO00429 736 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 WNT9BO14905 357 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 CLIC2O15247 247 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 SLC22A3O75751 556 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 MT-ND3P03897 115 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ZFYP08048 801 aaPredicted RBP4.48□□□□□ -1.69
VPS13A-211ENST00000484581 CHRNB2P17787 502 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 DNASE1P24855 282 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 PRKCIP41743 596 aa4.48□□□□□ -1.69
VPS13A-211ENST00000484581 ME1P48163 572 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms