RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 DNAJC12Q9UKB3 198 aa8.45□□□□□ -1.06
DDX39B-221ENST00000484566 MAN1B1Q9UKM7 699 aa8.45□□□□□ -1.06
DDX39B-221ENST00000484566 G3BP2Q9UN86 482 aaKnown RBP8.45□□□□□ -1.06
DDX39B-221ENST00000484566 SLC17A4Q9Y2C5 497 aa8.45□□□□□ -1.06
DDX39B-221ENST00000484566 TRBV23OR9-2A0A075B6M9 112 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 GTPBP10A4D1E9 387 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 TCP11X1B4DZS4 312 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 J3QW42 95 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 FOXN3O00409 490 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 FGF10O15520 208 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CREB3O43889 395 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CREG1O75629 220 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PALMO75781 387 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 LDLRP01130 860 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 FURINP09958 794 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 ANKRD34CP0C6C1 535 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SLC2A4P14672 509 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 GM2AP17900 193 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PON1P27169 355 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 TEAD1P28347 426 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 GARSP41250 739 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PTPN9P43378 593 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 GPR1P46091 355 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CSNK1DP48730 415 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 RAC1P63000 192 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 MRPL49Q13405 166 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 NFATC2Q13469 925 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SEMA5AQ13591 1074 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 DNASE1L3Q13609 305 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 INPP5JQ15735 1006 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CNGA3Q16281 694 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CCDC14Q49A88 953 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 RAB6CQ53S08 254 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CYB5D1Q6P9G0 228 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SLFN11Q7Z7L1 901 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 TMEM135Q86UB9 458 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SLC9B2Q86UD5 537 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 GALNT13Q8IUC8 556 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PLXDC1Q8IUK5 500 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 RASGRP3Q8IV61 690 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 UMODL1-AS1Q8N2C9 162 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 LZTR1Q8N653 840 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 AVL9Q8NBF6 648 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 FAM172AQ8WUF8 416 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 DTD2Q96FN9 168 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 COQ10AQ96MF6 247 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PLCD4Q9BRC7 762 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 RAB6CQ9H0N0 254 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SP110Q9HB58 689 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PDFQ9HBH1 243 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SARS2Q9NP81 518 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SLAMF7Q9NQ25 335 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 ACSS2Q9NR19 701 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 SIDT1Q9NXL6 827 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 CNOT8Q9UFF9 292 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 LNPEPQ9UIQ6 1025 aa8.44□□□□□ -1.06
DDX39B-221ENST00000484566 AJAP1Q9UKB5 411 aaPredicted RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PCDHGA9Q9Y5G4 932 aaKnown RBP8.44□□□□□ -1.06
DDX39B-221ENST00000484566 PRRC2CQ9Y520 2896 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 A0A1W2PQ67 120 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 ARHGAP42A6NI28 874 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 C2CD4BA6NLJ0 364 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 WASH4PA8MWX3 477 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 C21orf140B9A014 251 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 PSMD11O00231 422 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 DPM1O60762 260 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 PRAMEF11O60813 436 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 KIAA0754O94854 1291 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 HEXIM1O94992 359 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 NDUFA10O95299 355 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 RECKO95980 971 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 IGHA1P01876 353 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 MT-ND3P03897 115 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 FUCA1P04066 466 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 CYP2A6P11509 494 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 ZNF28P17035 718 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 CES1P23141 567 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 MSNP26038 577 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 VIPR1P32241 457 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 ETV3P41162 512 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 RGRP47804 291 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 LEPRP48357 1165 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 POLD2P49005 469 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 HDAC4P56524 1084 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 AP1S1P61966 158 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 CHRNA6Q15825 494 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 PRR30Q53SZ7 412 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 NAA35Q5VZE5 725 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 MARK2Q7KZI7 788 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 FAM71AQ8IYT1 594 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 SLC34A3Q8N130 599 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 PYROXD2Q8N2H3 581 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 GPT2Q8TD30 523 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 PDCD6IPQ8WUM4 868 aaKnown RBP8.43□□□□□ -1.06
DDX39B-221ENST00000484566 CPA5Q8WXQ8 436 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 THAP4Q8WY91 577 aa8.43□□□□□ -1.06
DDX39B-221ENST00000484566 RNF31Q96EP0 1072 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms