RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 DDX56Q9NY93 547 aaKnown RBP19.25■□□□□ 0.67
R3HDM1-215ENST00000483021 CPNE7Q9UBL6 633 aa19.25■□□□□ 0.67
R3HDM1-215ENST00000483021 SHOC2Q9UQ13 582 aa19.25■□□□□ 0.67
R3HDM1-215ENST00000483021 ADGRG1Q9Y653 693 aa19.25■□□□□ 0.67
R3HDM1-215ENST00000483021 CAPN5O15484 640 aaPredicted RBP19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 RAD1O60671 282 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 FAM87AP0C7U9 286 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 MAPK9P45984 424 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 MC2RQ01718 297 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 PCSK7Q16549 785 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 SNAP47Q5SQN1 464 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 CEACAM20Q6UY09 585 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 BZW1Q7L1Q6 419 aaKnown RBP19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 TMC3Q7Z5M5 1100 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 RHOT1Q8IXI2 618 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 GPR26Q8NDV2 337 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 GLYATL1Q969I3 302 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 TADA1Q96BN2 335 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 SLC12A9Q9BXP2 914 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 OSGEPL1Q9H4B0 414 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 UCK1Q9HA47 277 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 FBXO8Q9NRD0 319 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 KLC4Q9NSK0 619 aa19.24■□□□□ 0.67
R3HDM1-215ENST00000483021 A0A0A6YYK5 440 aaPredicted RBP19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 A8MU76 341 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 CHUKO15111 745 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 MFAP3LO75121 409 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 NDST3O95803 873 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 SLC4A1P02730 911 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 PIRTP0C851 137 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 LIFP15018 202 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 NR2C2P49116 596 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 UBE2IP63279 158 aaKnown RBP19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 CYP4F2P78329 520 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 INSCQ1MX18 579 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 TEX44Q53QW1 395 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 NPNTQ6UXI9 565 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 KDELC2Q7Z4H8 507 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 PLXDC1Q8IUK5 500 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 VSTM4Q8IW00 320 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 RTP4Q96DX8 246 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 NHEJ1Q9H9Q4 299 aaPredicted RBP19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 SPTLC3Q9NUV7 552 aa19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 UBR5O95071 2799 aaPredicted RBP19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 MN1Q10571 1320 aaPredicted RBP19.23■□□□□ 0.67
R3HDM1-215ENST00000483021 ZNF891A8MT65 544 aaPredicted RBP19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 KMOO15229 486 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 VEGFDO43915 354 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 PPFIA2O75334 1257 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 ANKRD34CP0C6C1 535 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 DYNLT1P63172 113 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 BORAQ6PGQ7 559 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 CRTC3Q6UUV7 619 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 ADGRG6Q86SQ4 1221 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 LRRTM4Q86VH4 590 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 NLGN4XQ8N0W4 816 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 NLGN4YQ8NFZ3 816 aaPredicted RBP19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 KIAA1143Q96AT1 154 aaPredicted RBP19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 RNF25Q96BH1 459 aaPredicted RBP19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 CATSPER2Q96P56 530 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 PLEKHG4BQ96PX9 1271 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 CHP1Q99653 195 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 TIMM29Q9BSF4 260 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 EFHD1Q9BUP0 239 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 ADNPQ9H2P0 1102 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 GLOD4Q9HC38 313 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 ARFGAP3Q9NP61 516 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 PRDM8Q9NQV8 689 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 PILRAQ9UKJ1 303 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 INTUQ9ULD6 942 aa19.22■□□□□ 0.67
R3HDM1-215ENST00000483021 SPOPO43791 374 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 MT-CYBP00156 380 aaPredicted RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 ITGB6P18564 788 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 XRCC1P18887 633 aaPredicted RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 MAP4P27816 1152 aaKnown RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TNNT3P45378 269 aaPredicted RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 NOP2P46087 812 aaKnown RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TFDP2Q14188 446 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 PRKD1Q15139 912 aaPredicted RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TCEAL1Q15170 157 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TRIM48Q8IWZ4 208 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 SPATA22Q8NHS9 363 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TEKT5Q96M29 485 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 VPS35Q96QK1 796 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TBC1D10AQ9BXI6 508 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 TRIT1Q9H3H1 467 aaKnown RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 CLMPQ9H6B4 373 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 GEMIN8Q9NWZ8 242 aaKnown RBP19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 KLHL3Q9UH77 587 aa19.21■□□□□ 0.67
R3HDM1-215ENST00000483021 MTSS1O43312 755 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 PSTPIP1O43586 416 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 PMPCBO75439 489 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 WISP1O95388 367 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 VIPP01282 170 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 ZNF7P17097 686 aaPredicted RBP19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 BPIP17213 487 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 PTPN3P26045 913 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 SKOR2Q2VWA4 1001 aaPredicted RBP19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 PLA2G4EQ3MJ16 856 aa19.2■□□□□ 0.66
R3HDM1-215ENST00000483021 ZNF648Q5T619 568 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms