RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
SQSTM1-207ENST00000481335 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
SQSTM1-207ENST00000481335 BOD1L1Q8NFC6 3051 aa11.99□□□□□ -0.49
SQSTM1-207ENST00000481335 MN1Q10571 1320 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 LOC285095A0A1B0GVY8 99 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 B8ZZF3 427 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 TOX3O15405 576 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 CST8O60676 142 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ZNF189O75820 626 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ZRANB2O95218 330 aaKnown RBP eCLIP11.98□□□□□ -0.491e-11■■□□□ 13.3
SQSTM1-207ENST00000481335 ANKRD34CP0C6C1 535 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 CCL4P13236 92 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 PLA2G2AP14555 144 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ZNF8P17098 575 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 VCLP18206 1134 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 XRCC1P18887 633 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 DYNLT1P63172 113 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 UBE2IP63279 158 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 TGIF1Q15583 401 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 PPP2R5EQ16537 467 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 PCSK7Q16549 785 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 DCAF12Q5T6F0 453 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 NKAIN2Q5VXU1 208 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 KIAA1614Q5VZ46 1190 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 C11orf63Q6NUN7 778 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 NPNTQ6UXI9 565 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 WASH2PQ6VEQ5 465 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 SPOCD1Q6ZMY3 1216 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ARHGAP22Q7Z5H3 698 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ADGRG6Q86SQ4 1221 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 LRRTM4Q86VH4 590 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 PLXDC1Q8IUK5 500 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 BRSK1Q8TDC3 778 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 FCRL5Q96RD9 977 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 FERMT1Q9BQL6 677 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 CEP41Q9BYV8 373 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ZCCHC2Q9C0B9 1178 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 WASH6PQ9NQA3 447 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 POT1Q9NUX5 634 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 CPNE7Q9UBL6 633 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 SHOC2Q9UQ13 582 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 KCNK6Q9Y257 313 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 PCYT1BQ9Y5K3 369 aaPredicted RBP11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
SQSTM1-207ENST00000481335 BSNQ9UPA5 3926 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 hCG_1818297A0A087WSY0 165 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 PRR19A6NJB7 356 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 EML2O95834 649 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 MT-CYBP00156 380 aaPredicted RBP11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 APOC2P02655 101 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 BPIP17213 487 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 CYLC1P35663 651 aaPredicted RBP11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 MAGEA1P43355 309 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 NOP2P46087 812 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 COPS2P61201 443 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 MPP3Q13368 585 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 XRCC4Q13426 336 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 INSCQ1MX18 579 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 AGAP9Q5VTM2 703 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 CEACAM20Q6UY09 585 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 ZFAND4Q86XD8 727 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 RCOR2Q8IZ40 523 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 BMPERQ8N8U9 685 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 ART4Q93070 314 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 NKD1Q969G9 470 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 EFHD1Q9BUP0 239 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 OR2AG1Q9H205 316 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 TRIT1Q9H3H1 467 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 FBXO8Q9NRD0 319 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 KLC4Q9NSK0 619 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 TRHDEQ9UKU6 1024 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 EFR3BQ9Y2G0 817 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 B3GALT1Q9Y5Z6 326 aa11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-207ENST00000481335 KLHL33A6NCF5 533 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 EFCAB7A8K855 629 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 CDK14O94921 469 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 C9P02748 559 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 ZNF7P17097 686 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 CD68P34810 354 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 UGT1A3P35503 534 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 PPM1FP49593 454 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 MC2RQ01718 297 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 WASHC5Q12768 1159 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 NFATC2Q13469 925 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 ITGA9Q13797 1035 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 GTF2H3Q13889 308 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 LY6DQ14210 128 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 SPA17Q15506 151 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 LDLRAP1Q5SW96 308 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 ALS2CLQ60I27 953 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 CYB5D1Q6P9G0 228 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 KDELC1Q6UW63 502 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 ABRAXAS1Q6UWZ7 409 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 TMEM26Q6ZUK4 368 aa11.96□□□□□ -0.49
SQSTM1-207ENST00000481335 BBS12Q6ZW61 710 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms