RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CAAP1Q9H8G2 361 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 SMOXQ9NWM0 555 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 IMPACTQ9P2X3 320 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 RSPH14Q9UHP6 348 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 MACROD2A1Z1Q3 448 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 B4E171 279 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CAPN5O15484 640 aaPredicted RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 PMPCBO75439 489 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CDK14O94921 469 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 MT-CYBP00156 380 aaPredicted RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 SLC4A1P02730 911 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 FUCA1P04066 466 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 ACP5P13686 325 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 NFKB1P19838 968 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 IDSP22304 550 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 TSPAN7P41732 249 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 ZNF75DP51815 510 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 VAV2P52735 878 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 WNT3AP56704 352 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 WASHC5Q12768 1159 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 KIF5AQ12840 1032 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CLN3Q13286 438 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 SLC1A5Q15758 541 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 MANEAQ5SRI9 462 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 AGAP9Q5VTM2 703 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 NPNTQ6UXI9 565 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 GDAP1Q8TB36 358 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 AGAP2Q99490 1192 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 TRIT1Q9H3H1 467 aaKnown RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 OSGEPL1Q9H4B0 414 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 RDH14Q9HBH5 336 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 WASH6PQ9NQA3 447 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 PDP2Q9P2J9 529 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 ATXN10Q9UBB4 475 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 CPNE7Q9UBL6 633 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 CNOT6Q9ULM6 557 aaKnown RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 SHOC2Q9UQ13 582 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 DNMT3AQ9Y6K1 912 aaPredicted RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
CCM2-213ENST00000480658 KNTC1P50748 2209 aa11.31□□□□□ -0.6
CCM2-213ENST00000480658 GLYATL1P3A0A0U1RQE8 302 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 A0A1W2PNU3 283 aaPredicted RBP11.3□□□□□ -0.6
CCM2-213ENST00000480658 C5orf60A6NFR6 353 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 H7C0C1 242 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 PPM1DO15297 605 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 B4GAT1O43505 415 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 CRTAMO95727 393 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 VIPP01282 170 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ANKRD34CP0C6C1 535 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 RALBP11234 206 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 PECAM1P16284 738 aaPredicted RBP11.3□□□□□ -0.6
CCM2-213ENST00000480658 ZNF8P17098 575 aaPredicted RBP11.3□□□□□ -0.6
CCM2-213ENST00000480658 BPIP17213 487 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 XRCC1P18887 633 aaPredicted RBP11.3□□□□□ -0.6
CCM2-213ENST00000480658 HADHAP40939 763 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ATP5OP48047 213 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 MAPK10P53779 464 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 IHHQ14623 411 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 P3H1Q32P28 736 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 SIRPB2Q5JXA9 342 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ARHGAP40Q5TG30 622 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ALS2CLQ60I27 953 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 CEACAM20Q6UY09 585 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 KDELC2Q7Z4H8 507 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ZNF567Q8N184 647 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 GPR26Q8NDV2 337 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 SPATA22Q8NHS9 363 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 SGF29Q96ES7 293 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 WDR24Q96S15 920 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 BAG1Q99933 345 aaPredicted RBP11.3□□□□□ -0.6
CCM2-213ENST00000480658 NUDT22Q9BRQ3 303 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 TSGA10Q9BZW7 698 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 SEMA6CQ9H3T2 930 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 VPS37BQ9H9H4 285 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 KLC4Q9NSK0 619 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 TBC1D29Q9UFV1 150 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 HYOU1Q9Y4L1 999 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 ADGRG1Q9Y653 693 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
CCM2-213ENST00000480658 PRAMEF33A0A0G2JMD5 474 aa11.29□□□□□ -0.6
CCM2-213ENST00000480658 A6NCN8 305 aa11.29□□□□□ -0.6
CCM2-213ENST00000480658 PDZK1P1A8MUH7 402 aa11.29□□□□□ -0.6
CCM2-213ENST00000480658 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
CCM2-213ENST00000480658 STX7O15400 261 aaKnown RBP11.29□□□□□ -0.6
CCM2-213ENST00000480658 PJA2O43164 708 aa11.29□□□□□ -0.6
CCM2-213ENST00000480658 SNX2O60749 519 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms