RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PRR23BQ6ZRT6 265 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CEP68Q76N32 757 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 GALNT13Q8IUC8 556 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PPTC7Q8NI37 304 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 NDNQ99608 321 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MCMBPQ9BTE3 642 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 AARSD1Q9BTE6 412 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SNRNP25Q9BV90 132 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 IDI2Q9BXS1 227 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 TM6SF2Q9BZW4 377 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 LHX5Q9H2C1 402 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 LRTM1Q9HBL6 345 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 DNAJC28Q9NX36 388 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CDC40O60508 579 aaKnown RBP eCLIP9.48□□□□□ -0.892e-13■■□□□ 11.5
VEGFA-212ENST00000480614 NR2C1P13056 603 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CRHR1P34998 444 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SPAM1P38567 509 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 KHKP50053 298 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 WNT3AP56704 352 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PITPNAQ00169 270 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CWF19L1Q69YN2 538 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 HIST1H2AAQ96QV6 131 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 P2RX7Q99572 595 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MIR1-1HGQ9H1L0 117 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SNX15Q9NRS6 342 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TIPRLO75663 272 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 NDST3O95803 873 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SCNN1GP51170 649 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ARPC4P59998 168 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PAMR1Q6UXH9 720 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 THAP5Q7Z6K1 395 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CPNE9Q8IYJ1 553 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 OR52K2Q8NGK3 314 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 AP4B1Q9Y6B7 739 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PIKFYVEQ9Y2I7 2098 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 LINC00032P0C843 101 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CRYBB1P53674 252 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MTMR9Q96QG7 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ADGRE2Q9UHX3 823 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHGB5Q9Y5G0 923 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 FKBP1BP68106 108 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SLC25A52Q3SY17 297 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CRTC3Q6UUV7 619 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 VSIG10LQ86VR7 867 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MFSD14AQ96MC6 490 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 C5orf34Q96MH7 638 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 FANCFQ9NPI8 374 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TAS2R7Q9NYW3 318 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TDRD6O60522 2096 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 hCG_1818297A0A087WSY0 165 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ERAL1O75616 437 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ITPKBP27987 946 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CCNFP41002 786 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PPP2R2BQ00005 443 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SRSF11Q05519 484 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 AUHQ13825 339 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SF1Q15637 639 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 C15orf59Q2T9L4 293 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 HDAC10Q969S8 669 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 C11orf24Q96F05 449 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MRIQ9BWK5 157 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 GLYATL1P3A0A0U1RQE8 302 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 AP5Z1O43299 807 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 BPGMP07738 259 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MC4RP32245 332 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 OR10G6Q8NH81 332 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 SNX33Q8WV41 574 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 OAS3Q9Y6K5 1087 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CYP3A7-CYP3A51PA0A087WV96 503 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3DA0A087WVF3 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3IA0A087WXS9 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3EA0A087X179 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3KA0A087X1G2 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3FA6NER0 549 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3LB9A6J9 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CLDN9O95484 217 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 NADKO95544 446 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3HP0C7X1 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CYP3A7P24462 503 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 UBAP2LQ14157 1087 aaKnown RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3GQ6DHY5 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3CQ6IPX1 549 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D3Q8IZP1 549 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 MPP5Q8N3R9 675 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 TTC29Q8NA56 475 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CAMK1GQ96NX5 476 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 PTPRAP18433 802 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 IDSP22304 550 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 STRADAQ7RTN6 431 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF567Q8N184 647 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CYP2W1Q8TAV3 490 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 RCN3Q96D15 328 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF347Q96SE7 839 aa9.48□□□□□ -0.89
VEGFA-212ENST00000480614 FUCA2Q9BTY2 467 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms