RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
COMMD4-203ENST00000480484 ARMC1Q9NVT9 282 aa10.09□□□□□ -0.79
COMMD4-203ENST00000480484 TMEM9Q9P0T7 183 aa10.09□□□□□ -0.79
COMMD4-203ENST00000480484 ZNF229Q9UJW7 825 aa10.09□□□□□ -0.79
COMMD4-203ENST00000480484 TRAF6Q9Y4K3 522 aa10.09□□□□□ -0.79
COMMD4-203ENST00000480484 ZCWPW2A0A1B0GU75 182 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 AREL1O15033 823 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 XYLBO75191 536 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 BEST1O76090 585 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 GUCA1CO95843 209 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 SNAI1O95863 264 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 KCNA5P22460 613 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 TKTP29401 623 aaKnown RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 RPS9P46781 194 aaKnown RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 TMBIM6P55061 237 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 PIGFQ07326 219 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ZNF846Q147U1 533 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 POLD3Q15054 466 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 PPA1Q15181 289 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ZNF792Q3KQV3 632 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ZNF484Q5JVG2 852 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 FRA10AC1Q70Z53 315 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 DENND6AQ8IWF6 608 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 PACRGLQ8N7B6 248 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 KIAA1191Q96A73 305 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CENPNQ96H22 339 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 SH3YL1Q96HL8 342 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 MUS81Q96NY9 551 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 TSGA13Q96PP4 275 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ZNF347Q96SE7 839 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 NACA2Q9H009 215 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 GBA2Q9HCG7 927 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 AGPAT4Q9NRZ5 378 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 GPR34Q9UPC5 381 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 MAN1A2O60476 641 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 SLC35E2BP0CK96 405 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 NCK1P16333 377 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 HLCSP50747 726 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 HK2P52789 917 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 LSM3P62310 102 aaKnown RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 SLC6A3Q01959 620 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 GRIK4Q16099 956 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 INAQ16352 499 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 DPYSL2Q16555 572 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 FAM187BQ17R55 369 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 TIGD2Q4W5G0 525 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CYBRD1Q53TN4 286 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CCNYL2Q5T2Q4 361 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CRTC3Q6UUV7 619 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 LRRC69Q6ZNQ3 347 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 RAB2BQ8WUD1 216 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 STYXQ8WUJ0 223 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 DPF3Q92784 378 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ISL2Q96A47 359 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 PHF21BQ96EK2 531 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 TDRD1Q9BXT4 1180 aaKnown RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 MROQ9BYG7 248 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 HMG20AQ9NP66 347 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.08□□□□□ -0.8
COMMD4-203ENST00000480484 B3GNT3Q9Y2A9 372 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ACOT9Q9Y305 439 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 FRMPD3Q5JV73 1810 aa10.08□□□□□ -0.8
COMMD4-203ENST00000480484 ASB14A6NK59 587 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 PPP6CO00743 305 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 NME4O00746 187 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 RSL1D1O76021 490 aaKnown RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 CNOT4O95628 575 aaKnown RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 ALBP02768 609 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 SMPD1P17405 629 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 PSMD8P48556 350 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 PRKAA2P54646 552 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 TPD52P55327 224 aaPredicted RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 STX1BP61266 288 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 CTBP1Q13363 440 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 SLC12A1Q13621 1099 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 ATP6AP1Q15904 470 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 VPS26BQ4G0F5 336 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 SYPL2Q5VXT5 272 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 CLEC6AQ6EIG7 209 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 CENPLQ8N0S6 344 aaPredicted RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 PELI3Q8N2H9 469 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 PARP8Q8N3A8 854 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 SYNPOQ8N3V7 929 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 TXNDC5Q8NBS9 432 aaKnown RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 RDH11Q8TC12 318 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 C1orf74Q96LT6 269 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 NFKBIZQ9BYH8 718 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 TRIM15Q9C019 465 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 DNAI2Q9GZS0 605 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 KATNBL1Q9H079 304 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 USP22Q9UPT9 525 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 TTC24A2A3L6 582 aaPredicted RBP10.07□□□□□ -0.8
COMMD4-203ENST00000480484 AXIN1O15169 862 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 RASAL1O95294 804 aa10.07□□□□□ -0.8
COMMD4-203ENST00000480484 MBL2P11226 248 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms