RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SEMA6CQ9H3T2 930 aa15.17■□□□□ 0.02
CDK9-203ENST00000480353 KLC4Q9NSK0 619 aa15.17■□□□□ 0.02
CDK9-203ENST00000480353 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDK9-203ENST00000480353 AAR2Q9Y312 384 aaKnown RBP15.17■□□□□ 0.02
CDK9-203ENST00000480353 SPO11Q9Y5K1 396 aa15.17■□□□□ 0.02
CDK9-203ENST00000480353 SCN8AQ9UQD0 1980 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 LOC285095A0A1B0GVY8 99 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 A0A1W2PNU3 283 aaPredicted RBP15.16■□□□□ 0.02
CDK9-203ENST00000480353 PMS2P1A4D2B8 440 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 OR5K4A6NMS3 321 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 CDRT15L2A8MXV6 281 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 PPM1DO15297 605 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 PJA2O43164 708 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 VEGFDO43915 354 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 CDK14O94921 469 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 RBP3P10745 1247 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 SLC5A2P31639 672 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 CSTF2P33240 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK9-203ENST00000480353 HMGCLP35914 325 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 SPAM1P38567 509 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 ZFP36L1Q07352 338 aaKnown RBP15.16■□□□□ 0.02
CDK9-203ENST00000480353 NFATC2Q13469 925 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 NR1D2Q14995 579 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 NKAIN2Q5VXU1 208 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 KDELC1Q6UW63 502 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 CLEC14AQ86T13 490 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 EID2BQ96D98 161 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 MRGPRX2Q96LB1 330 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 NUDT22Q9BRQ3 303 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 FICDQ9BVA6 458 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 LACRTQ9GZZ8 138 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 GBA3Q9H227 469 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 PRORYQ9H606 182 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 NFKBIL1Q9UBC1 381 aaPredicted RBP15.16■□□□□ 0.02
CDK9-203ENST00000480353 PCDHB11Q9Y5F2 797 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 ST14Q9Y5Y6 855 aa15.16■□□□□ 0.02
CDK9-203ENST00000480353 IGHV1OR21-1A0A087WYE8 117 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 KIR2DS5A0A0G2JLQ3 304 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 A0A0G2JNG1 304 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 TEX51A0A1B0GUA7 166 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 PDZK1P1A8MUH7 402 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 MIF4GDA9UHW6 222 aaKnown RBP15.15■□□□□ 0.02
CDK9-203ENST00000480353 KIR2DS3K7RE56 304 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 AURKAO14965 403 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 STX7O15400 261 aaKnown RBP15.15■□□□□ 0.02
CDK9-203ENST00000480353 MTX2O75431 263 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 F3P13726 295 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 ITIH1P19827 911 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 CDC25BP30305 580 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 PTPN7P35236 360 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 CHRNA4P43681 627 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 FASLGP48023 281 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 TRA2AQ13595 282 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDK9-203ENST00000480353 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 KIR2DS5Q14953 304 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 ARHGAP40Q5TG30 622 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 FAM151BQ6UXP7 276 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 ADGRG6Q86SQ4 1221 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 ZNF761Q86XN6 746 aaPredicted RBP15.15■□□□□ 0.02
CDK9-203ENST00000480353 TRAPPC5Q8IUR0 188 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 SLITRK4Q8IW52 837 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 SFRP1Q8N474 314 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 TTC13Q8NBP0 860 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 RCBTB1Q8NDN9 531 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 OR4D9Q8NGE8 314 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 BRSK1Q8TDC3 778 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 OXNAD1Q96HP4 312 aaPredicted RBP15.15■□□□□ 0.02
CDK9-203ENST00000480353 CCDC74BQ96LY2 380 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 FAM118BQ9BPY3 351 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 DESI2Q9BSY9 194 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 TBC1D29Q9UFV1 150 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 DNAJC16Q9Y2G8 782 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 REXO2Q9Y3B8 237 aaKnown RBP15.15■□□□□ 0.02
CDK9-203ENST00000480353 PCDHGA7Q9Y5G6 932 aa15.15■□□□□ 0.02
CDK9-203ENST00000480353 ZFHX4Q86UP3 3567 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 LAMA5O15230 3695 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 GLYATL1P3A0A0U1RQE8 302 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 GRID2IPA4D2P6 1211 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 C2orf81A6NN90 581 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 HGSO14964 777 aaPredicted RBP15.14■□□□□ 0.01
CDK9-203ENST00000480353 PPFIA2O75334 1257 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 VIPP01282 170 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 CD1CP29017 333 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 AKT1P31749 480 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 SEPT7Q16181 437 aaKnown RBP15.14■□□□□ 0.01
CDK9-203ENST00000480353 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 SNAP47Q5SQN1 464 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 LDLRAP1Q5SW96 308 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 ANKRD20A3Q5VUR7 823 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 IYDQ6PHW0 289 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 CCDC81Q6ZN84 652 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 ARHGEF18Q6ZSZ5 1173 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 NCSTNQ92542 709 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 USP7Q93009 1102 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 VPS35Q96QK1 796 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 CPNE5Q9HCH3 593 aa15.14■□□□□ 0.01
CDK9-203ENST00000480353 SARS2Q9NP81 518 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms