RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NELL1Q92832 810 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 AHCYL2Q96HN2 611 aaKnown RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF599Q96NL3 588 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UNC93B1Q9H1C4 597 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TAS2R1Q9NYW7 299 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ENOPH1Q9UHY7 261 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 SLC27A6Q9Y2P4 619 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TPRKBQ9Y3C4 175 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CITO14578 2027 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UBR2Q8IWV8 1755 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 EDIL3O43854 480 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 GPR32O75388 356 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF865P0CJ78 1059 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CCL5P13501 91 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UGT1A6P19224 532 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UGT1A1P22309 533 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UGT1A4P22310 534 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 NOS3P29474 1203 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UGT1A3P35503 534 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UGT1A5P35504 534 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PEX6Q13608 980 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TYW3Q6IPR3 259 aaKnown RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PAQR3Q6TCH7 311 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 SPATA19Q7Z5L4 167 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CFAP206Q8IYR0 622 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CPA6Q8N4T0 437 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ITCHQ96J02 903 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TRAPPC9Q96Q05 1148 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TMEM209Q96SK2 561 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 C11orf84Q9BUA3 381 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 MIR1-1HGQ9H1L0 117 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 SGK2Q9HBY8 427 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 MIOSQ9NXC5 875 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 NSG1P42857 185 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 KIR3DL1P43629 444 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CBX2Q14781 532 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PHYKPLQ8IUZ5 450 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ARNTL2Q8WYA1 636 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 TMEM175Q9BSA9 504 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CEP44Q9C0F1 390 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 NUDT4Q9NZJ9 180 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 C3orf18Q9UK00 162 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 BBIP1A8MTZ0 92 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 AGRPO00253 132 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PRKCGP05129 697 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 IQCF3P0C7M6 154 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 IDH3AP50213 366 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PLA2G4EQ3MJ16 856 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CNKSR3Q6P9H4 555 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 TCAIMQ8N3R3 496 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 ZFRQ96KR1 1074 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 NDEL1Q9GZM8 345 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PAPOLBQ9NRJ5 636 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CDH22Q9UJ99 828 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 RWDD3Q9Y3V2 267 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 INSL6Q9Y581 213 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 MYADML2A6NDP7 307 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 NIPSNAP2O75323 286 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CLDN9O95484 217 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 AHSGP02765 367 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 GSNP06396 782 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 BLVRAP53004 296 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CYP4F2P78329 520 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 MS4A13Q5J8X5 152 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 BNIPLQ7Z465 357 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 C8orf59Q8N0T1 100 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 ZFP28Q8NHY6 868 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PAWRQ96IZ0 340 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 INTS10Q9NVR2 710 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 FNIP2Q9P278 1114 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 SLC2A6Q9UGQ3 507 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 ATXN2Q99700 1313 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PGM3O95394 542 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 VAV1P15498 845 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 GHRHRQ02643 423 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 EPS8Q12929 822 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 INO80DQ53TQ3 878 aaPredicted RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 SIRPB2Q5JXA9 342 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 R3HCC1LQ7Z5L2 792 aaKnown RBP14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CNTD1Q8N815 330 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 OR10G6Q8NH81 332 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 PSMD13Q9UNM6 376 aa14.1□□□□□ -0.15
NPHP4-208ENST00000478423 CST1P01037 141 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 SLC10A3P09131 477 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 RANBP1P43487 201 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 PCYT1AP49585 367 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 POLR2JP52435 117 aaKnown RBP14.09□□□□□ -0.15
NPHP4-208ENST00000478423 HLA-DQA1Q5Y7H0 255 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CMTM8Q8IZV2 173 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 DDHD1Q8NEL9 900 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 GSAPA4D1B5 854 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 FAM72CH0Y354 149 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 CNMDO75829 334 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 GALTP07902 379 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 NR2F1P10589 423 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 UROSP10746 265 aa14.09□□□□□ -0.15
NPHP4-208ENST00000478423 HAPLN1P10915 354 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms