RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 VWA5B1Q5TIE3 1220 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CHSY3Q70JA7 882 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 RETREG3Q86VR2 466 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 STX12Q86Y82 276 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 MCUQ8NE86 351 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 KLF6Q99612 283 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SEMA6AQ9H2E6 1030 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 SLCO3A1Q9UIG8 710 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
RTFDC1-207ENST00000477573 ANK1P16157 1881 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 LACTBL1A8MY62 500 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 I3L521 148 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 GREM1O60565 184 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 CPNE3O75131 537 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 KRT34O76011 436 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 GABARAPO95166 117 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 SNX4O95219 450 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 CYP2B6P20813 491 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 NUDT2P50583 147 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 KLF10Q13118 480 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 CEACAM7Q14002 265 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 MFSD10Q14728 455 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 LTB4RQ15722 352 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 PARP15Q460N3 678 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 TYW3Q6IPR3 259 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 STK32CQ86UX6 486 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 ATP6V1E2Q96A05 226 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 MAGEB10Q96LZ2 347 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 ZFP14Q9HCL3 533 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 POLE3Q9NRF9 147 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 SNX15Q9NRS6 342 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 SNX13Q9Y5W8 968 aa12.58□□□□□ -0.4
RTFDC1-207ENST00000477573 DLGAP1O14490 977 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ANGPT2O15123 496 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PIGNO95427 931 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 SELLP14151 372 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 MTHFRP42898 656 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 RECQLP46063 649 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 NOMO3P69849 1222 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PIK3R6Q5UE93 754 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PHF13Q86YI8 300 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 NKAIN4Q8IVV8 208 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 OR52H1Q8NGJ2 320 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 OR2T34Q8NGX1 318 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ATG4AQ8WYN0 398 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 YIPF5Q969M3 257 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 TBC1D20Q96BZ9 403 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 SERAC1Q96JX3 654 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF416Q9BWM5 594 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF518BQ9C0D4 1074 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 COQ3Q9NZJ6 369 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 FLRT1Q9NZU1 646 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 GMPR2Q9P2T1 348 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 GLS2Q9UI32 602 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ANAPC7Q9UJX3 599 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 KRT87PA6NCN2 255 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 TRIM38O00635 465 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 E2F3O00716 465 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 SOCS2O14508 198 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 CD58P19256 250 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 FMO4P31512 558 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 POLR2IP36954 125 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 RPS5P46782 204 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ARCN1P48444 511 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PSMD8P48556 350 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PSEN2P49810 448 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 IDH3AP50213 366 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF45Q02386 682 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 GAD2Q05329 585 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF267Q14586 743 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PSMD5Q16401 504 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 JADE1Q6IE81 842 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PNCKQ6P2M8 343 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 MON1BQ7L1V2 547 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 CATSPER4Q7RTX7 472 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 SCUBE3Q8IX30 993 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 TMEM192Q8IY95 271 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 METTL4Q8N3J2 472 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 OR4M2Q8NGB6 313 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 OR13J1Q8NGT2 312 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 RP9Q8TA86 221 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms