RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 EML2O95834 649 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 EPOP01588 193 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ACP5P13686 325 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF8P17098 575 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A6P19224 532 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A1P22309 533 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A4P22310 534 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ALDH4A1P30038 563 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A3P35503 534 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A5P35504 534 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 PDX1P52945 283 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 GEMP55040 296 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 OR1D5P58170 312 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 BIRC2Q13490 618 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ERCC6LQ2NKX8 1250 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 AMZ1Q400G9 498 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ATP13A5Q4VNC0 1218 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ITPRIPL1Q6GPH6 555 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 C8orf74Q6P047 294 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 CRTC3Q6UUV7 619 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 USP53Q70EK8 1073 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 GLT6D1Q7Z4J2 308 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 MAATS1Q7Z4T9 603 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 B3GNT8Q7Z7M8 397 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF761Q86XN6 746 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 RAVER1Q8IY67 606 aaKnown RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 NAGSQ8N159 534 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 TTC30BQ8N4P2 665 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 TRAM1L1Q8N609 369 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 FAM71DQ8N9W8 422 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 OR6C4Q8NGE1 309 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 FERMT1Q9BQL6 677 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ZSCAN5AQ9BUG6 496 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 FSD1LQ9BXM9 530 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A7Q9HAW7 530 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A10Q9HAW8 530 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 UGT1A8Q9HAW9 530 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 EPB41L5Q9HCM4 733 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 DKK4Q9UBT3 224 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 TMPRSS11EQ9UL52 423 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 SATB2Q9UPW6 733 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 KCNK6Q9Y257 313 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 V9GYY5 206 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-221ENST00000477561 ASXL3Q9C0F0 2248 aa8.19□□□□□ -1.1
HDAC6-221ENST00000477561 PPM1DO15297 605 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 GPR39O43194 453 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 GRID2O43424 1007 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 NUAK1O60285 661 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 PHF2O75151 1096 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TCEA3O75764 348 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ANXA9O76027 345 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 HLA-DPA1P20036 260 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ITPKBP27987 946 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 CA5AP35218 305 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 HMGCLP35914 325 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 FNTAP49354 379 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 PPM1FP49593 454 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 GDF10P55107 478 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 DCDC1P59894 354 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 B4GALNT1Q00973 533 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KLF1Q13351 362 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 PRPSAP1Q14558 356 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 CHRNA6Q15825 494 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 COL28A1Q2UY09 1125 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 PLA2G4EQ3MJ16 856 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KHDC1Q4VXA5 237 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 FAM151BQ6UXP7 276 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ARHGEF18Q6ZSZ5 1173 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TMPRSS9Q7Z410 1059 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 SPRED1Q7Z699 444 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ADGRG6Q86SQ4 1221 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 C17orf82Q86X59 251 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KLHL7Q8IXQ5 586 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 NOA1Q8NC60 698 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 WDR48Q8TAF3 677 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 GDAP1Q8TB36 358 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ATG4AQ8WYN0 398 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 GLYATL1Q969I3 302 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 MAGOHBQ96A72 148 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 NAF1Q96HR8 494 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 SPATA13Q96N96 652 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 SRPK1Q96SB4 655 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KRT12Q99456 494 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TMEM121Q9BTD3 319 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 AP1M1Q9BXS5 423 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 FRMD8P1Q9BZ68 369 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TRABDQ9H4I3 376 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 POLR1BQ9H9Y6 1135 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 RDH14Q9HBH5 336 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 IL26Q9NPH9 171 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KLC4Q9NSK0 619 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ARGLU1Q9NWB6 273 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 IL17CQ9P0M4 197 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms