RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 FAM72CH0Y354 149 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 MTSS1O43312 755 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 SNX2O60749 519 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 MATN4O95460 622 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 LINC00032P0C843 101 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 PSMB9P28065 219 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 OR4D2P58180 307 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 TPI1P60174 286 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 SH3BP2P78314 561 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 KCNAB2Q13303 367 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 FSCN1Q16658 493 aaKnown RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 AMHR2Q16671 573 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 FAM98BQ52LJ0 330 aaKnown RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 ZNF678Q5SXM1 525 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 FAM72AQ5TYM5 149 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 FAM72DQ6L9T8 149 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 RBM23Q86U06 439 aaKnown RBP13.34□□□□□ -0.27
DFFB-209ENST00000477548 FAM72BQ86X60 149 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 RIMKLAQ8IXN7 391 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 MBOAT4Q96T53 435 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 AMBRA1Q9C0C7 1298 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 BTRCQ9Y297 605 aa13.34□□□□□ -0.27
DFFB-209ENST00000477548 XPNPEP2O43895 674 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 MFN2O95140 757 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 HPRP00739 348 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.27
DFFB-209ENST00000477548 EPS8Q12929 822 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 ACAP2Q15057 778 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 COQ5Q5HYK3 327 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 PAGE3Q5JUK9 113 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 DESI1Q6ICB0 168 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 TTC23LQ6PF05 361 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 RALGPS2Q86X27 583 aaPredicted RBP13.33□□□□□ -0.27
DFFB-209ENST00000477548 SVOPQ8N4V2 548 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 IPMKQ8NFU5 416 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 SPATA22Q8NHS9 363 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 KLRG1Q96E93 195 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 PPP1R16BQ96T49 567 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.27
DFFB-209ENST00000477548 DDX28Q9NUL7 540 aaKnown RBP13.33□□□□□ -0.27
DFFB-209ENST00000477548 ANK1P16157 1881 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 RLFQ13129 1914 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 GNGT2O14610 69 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 NCAM2O15394 837 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 HCRTO43612 131 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 RAP2AP10114 183 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 SPNP16150 400 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 FSHRP23945 695 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 ARNTP27540 789 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 ARL1P40616 181 aaPredicted RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 MAP2K4P45985 399 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 DIO3P55073 304 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 SLX4IPQ5VYV7 408 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 STEAP3Q658P3 488 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 C11orf74Q86VG3 221 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 NPWQ8N729 165 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 C2CD4AQ8NCU7 369 aaPredicted RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 ATL1Q8WXF7 558 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 RDH12Q96NR8 316 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 CDK5RAP1Q96SZ6 601 aaKnown RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 OR2B2Q9GZK3 357 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 SLAMF8Q9P0V8 285 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 CCDC154A6NI56 674 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 H0Y626 953 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 PPP6CO00743 305 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 AZIN1O14977 448 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 AREL1O15033 823 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 TULP3O75386 442 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 TRIM16O95361 564 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 IQCF3P0C7M6 154 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 PAMP19021 973 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 DNAJB2P25686 324 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 HTR1EP28566 365 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 ACADSBP45954 432 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 FOXA1P55317 472 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 MRPS15P82914 257 aaKnown RBP13.33□□□□□ -0.28
DFFB-209ENST00000477548 TNFAIP2Q03169 654 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 MBTD1Q05BQ5 628 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 COLEC12Q5KU26 742 aa13.33□□□□□ -0.28
DFFB-209ENST00000477548 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms