RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 HSPA7P48741 367 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 HPCAP84074 193 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 FNDC3BQ53EP0 1204 aaKnown RBP14.52□□□□□ -0.09
HDAC6-220ENST00000477528 C6orf52Q5T4I8 152 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 GLYATQ6IB77 296 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 NECAB2Q7Z6G3 386 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.52□□□□□ -0.09
HDAC6-220ENST00000477528 ARL14EPQ8N8R7 260 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-220ENST00000477528 FAM47BQ8NA70 645 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 NELL1Q92832 810 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 MRGPRX2Q96LB1 330 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 PPM1MQ96MI6 270 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 RIBC2Q9H4K1 309 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 BRD9Q9H8M2 597 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 SRRDQ9UH36 339 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 C9JVG2 144 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 SH3BGRLO75368 114 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 CYP11A1P05108 521 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 CAPN1P07384 714 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 UMPSP11172 480 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 ZIK1Q3SY52 487 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-220ENST00000477528 XKR6Q5GH73 641 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 TIFAQ96CG3 184 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.09
HDAC6-220ENST00000477528 PADI4Q9UM07 663 aa14.52□□□□□ -0.09
HDAC6-220ENST00000477528 MAP3K13O43283 966 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 SIX3O95343 332 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 CXCL14O95715 111 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 HOXB6P17509 224 aaKnown RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 TP53BP2Q13625 1128 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 ALFQ53S48 1182 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 SPESP1Q6UW49 350 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 PATL1Q86TB9 770 aaKnown RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 CYP4Z1Q86W10 505 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 TRIM69Q86WT6 500 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 LRTOMTQ8WZ04 291 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 GLMNQ92990 594 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 MIPEPQ99797 713 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 REEP1Q9H902 201 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 MYADML2A6NDP7 307 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 DNAJA2O60884 412 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 EFCAB14O75071 495 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 CST1P01037 141 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 RPN2P04844 631 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 TOP3AQ13472 1001 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 PIM3Q86V86 326 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 SVOPQ8N4V2 548 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 TRIB2Q92519 343 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 DACT3Q96B18 629 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 WDR6Q9NNW5 1121 aaKnown RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 THG1LQ9NWX6 298 aaKnown RBP14.51□□□□□ -0.09
HDAC6-220ENST00000477528 KCTD3Q9Y597 815 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 SFRP1Q8N474 314 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 RAD21L1Q9H4I0 556 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 AKTIPQ9H8T0 292 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 NMUR1Q9HB89 426 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 GKN1Q9NS71 199 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 ATAD3AQ9NVI7 634 aa14.51□□□□□ -0.09
HDAC6-220ENST00000477528 ZCWPW2A0A1B0GU75 182 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PRR23AA6NEV1 266 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 RFXANKO14593 260 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 UGT2B4P06133 528 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 CNPP09543 421 aaKnown RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 SLC35E2BP0CK96 405 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 LEPRP48357 1165 aaKnown RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 SLC11A1P49279 550 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 CYP2A13Q16696 494 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 SULT1C3Q6IMI6 304 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PRR11Q96HE9 360 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PPP1R16AQ96I34 528 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 CEP44Q9C0F1 390 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 EXOSC4Q9NPD3 245 aaKnown RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 GABRQQ9UN88 632 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 DMTF1Q9Y222 760 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 FAM20BO75063 409 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ECI2O75521 394 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PCDH8O95206 1070 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 GLUD1P00367 558 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 STC1P52823 247 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ATXN7L2Q5T6C5 722 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ANO7Q6IWH7 933 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 TXNDC5Q8NBS9 432 aaKnown RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ASZ1Q8WWH4 475 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 RORBQ92753 470 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 UBE2E3Q969T4 207 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 TNKS2Q9H2K2 1166 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 AK5Q9Y6K8 562 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PTGES3LE9PB15 166 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 CLDN9O95484 217 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ABRQ12979 859 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PLEKHG4Q58EX7 1191 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 ALKAL1Q6UXT8 129 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 CENPNQ96H22 339 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-220ENST00000477528 PLEKHA8Q96JA3 519 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 OSGEPL1Q9H4B0 414 aa14.5□□□□□ -0.09
HDAC6-220ENST00000477528 SGTAO43765 313 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms