RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RGS11O94810 467 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 PYGLP06737 847 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CTPS1P17812 591 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 XBP1P17861 261 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 KCNA5P22460 613 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CNTFP26441 200 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 LIFRP42702 1097 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 GYG1P46976 350 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 NAA25Q14CX7 972 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CALCRLQ16602 461 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 PRICKLE4Q2TBC4 344 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 ZNF766Q5HY98 468 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CES5AQ6NT32 575 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CASC1Q6TDU7 716 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 IL20RBQ6UXL0 311 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 C15orf52Q6ZUT6 534 aaKnown RBP4.09□□□□□ -1.75
UBR3-209ENST00000477461 TUBA1AQ71U36 451 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 ADGRG6Q86SQ4 1221 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CNTROBQ8N137 903 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 CPXM2Q8N436 756 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 ZNF441Q8N8Z8 693 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 DNAAF1Q8NEP3 725 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 RNF183Q96D59 192 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 HES6Q96HZ4 224 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 TUBA1CQ9BQE3 449 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 COA1Q9GZY4 146 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 BOLA2Q9H3K6 86 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 MROH8Q9H579 483 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 POLLQ9UGP5 575 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 HSF4Q9ULV5 492 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CCDC189A1A4V9 331 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 TAF4O00268 1085 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 ECE2O60344 883 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 ATP2C2O75185 946 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CRYAAP02489 173 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 IGHV4-30-4P0DP06 118 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 MYH7P12883 1935 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 MYF6P23409 242 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 ARL1P40616 181 aaPredicted RBP4.08□□□□□ -1.76
UBR3-209ENST00000477461 CXCR3P49682 368 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CLCN3P51790 818 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
UBR3-209ENST00000477461 HDAC4P56524 1084 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 DMP1Q13316 513 aaPredicted RBP4.08□□□□□ -1.76
UBR3-209ENST00000477461 LTBP1Q14766 1721 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 DCAF6Q58WW2 860 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 KLHL24Q6TFL4 600 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 MMS22LQ6ZRQ5 1243 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 DENND6AQ8IWF6 608 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 ESX1Q8N693 406 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 EVI5LQ96CN4 794 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 HVCN1Q96D96 273 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 ELP4Q96EB1 424 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 EP400Q96L91 3159 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 C3orf30Q96M34 536 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 LRFN5Q96NI6 719 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 PGLYRP2Q96PD5 576 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 FSD1Q9BTV5 496 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 INTS2Q9H0H0 1204 aaKnown RBP4.08□□□□□ -1.76
UBR3-209ENST00000477461 DBNDD1Q9H9R9 158 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CD209Q9NNX6 404 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 NOX4Q9NPH5 578 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 SCRT2Q9NQ03 307 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 PAG1Q9NWQ8 432 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 IFT80Q9P2H3 777 aaPredicted RBP4.08□□□□□ -1.76
UBR3-209ENST00000477461 ZNF69Q9UC07 566 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 CRYL1Q9Y2S2 319 aa4.08□□□□□ -1.76
UBR3-209ENST00000477461 AKAP11Q9UKA4 1901 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 DICER1Q9UPY3 1922 aaKnown RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 DUOX1Q9NRD9 1551 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 ARHGAP10A1A4S6 786 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 CBY3A6NI87 242 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 HIP1O00291 1037 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 HSPA12AO43301 675 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 EIF5BO60841 1220 aaKnown RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 IDH1O75874 414 aaKnown RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 PAK4O96013 591 aaPredicted RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 PTPN2P17706 415 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 TTKP33981 857 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 ZBTB17Q13105 803 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 TNIP1Q15025 636 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 NFIL3Q16649 462 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 BMP2KLQ5H9B9 411 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 ZSCAN25Q6NSZ9 544 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 CCDC129Q6ZRS4 1044 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 SHFQ7M4L6 423 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 CERS3Q8IU89 383 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 KBTBD3Q8NAB2 608 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 C11orf65Q8NCR3 313 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 TDRD7Q8NHU6 1098 aaKnown RBP4.07□□□□□ -1.76
UBR3-209ENST00000477461 CREB3L4Q8TEY5 395 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 RUFY2Q8WXA3 655 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 PPM1MQ96MI6 270 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 UHRF2Q96PU4 802 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 UBTD1Q9HAC8 227 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 DIAPH3Q9NSV4 1193 aa4.07□□□□□ -1.76
UBR3-209ENST00000477461 SPATS2LQ9NUQ6 558 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms