RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	NSUN4	Q96CB9	384 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	CALML4	Q96GE6	196 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	IL17F	Q96PD4	163 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	DUX5	Q96PT3	197 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	DDX31	Q9H8H2	851 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	PCDHGB4	Q9UN71	923 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	SMTNL1	A8MU46	457 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	MAP2K7	O14733	419 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	CAMTA2	O94983	1202 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	TUBB	P07437	444 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	UGT1A1	P22309	533 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	HOXA13	P31271	388 aa	Predicted RBP	4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	ACTN2	P35609	894 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	ACVR2B	Q13705	512 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	KRTCAP3	Q53RY4	240 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	LCN10	Q6JVE6	187 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SPSB3	Q6PJ21	355 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	TMED8	Q6PL24	325 aa	Predicted RBP	4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	UNQ6126/PRO20091	Q6UXV3	157 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	RAD9B	Q6WBX8	426 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SCYL3	Q8IZE3	742 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	TAGAP	Q8N103	731 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	TMTC2	Q8N394	836 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	GSDMB	Q8TAX9	411 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC38A5	Q8WUX1	472 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SORCS1	Q8WY21	1168 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	MOAP1	Q96BY2	351 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	CDCA5	Q96FF9	252 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SEMA3C	Q99985	751 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	RETREG1	Q9H6L5	497 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	UBTD1	Q9HAC8	227 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM30A	Q9NV96	361 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	PAG1	Q9NWQ8	432 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	B3GALT5	Q9Y2C3	310 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	OR2W1	Q9Y3N9	320 aa		4.15	□□□□□ -1.75
RBM39-231	ENST00000477334	IGHV4OR15-8	A0A075B7B6	117 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	DENND3	A2RUS2	1198 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	LILRA5	A6NI73	299 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	CDRT15L2	A8MXV6	281 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	PRAC2	D3DTV9	90 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TULP2	O00295	520 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	SMAD9	O15198	467 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	AHCYL1	O43865	530 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TSPAN9	O75954	239 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	CDH1	P12830	882 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	ACSL1	P33121	698 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC15A1	P46059	708 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	AMPH	P49418	695 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	PPP2R2B	Q00005	443 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	SPOCK1	Q08629	439 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	DLG2	Q15700	870 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	MYLK3	Q32MK0	819 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	PLEKHS1	Q5SXH7	462 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	RARS2	Q5T160	578 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	IRAK1BP1	Q5VVH5	260 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TRNP1	Q6NT89	227 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	ATG9A	Q7Z3C6	839 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	PCGF5	Q86SE9	256 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TMPRSS12	Q86WS5	348 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	MAP7D3	Q8IWC1	876 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	EMC1	Q8N766	993 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	KCNH5	Q8NCM2	988 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	THAP6	Q8TBB0	222 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	DNAAF4	Q8WXU2	420 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	FAM84B	Q96KN1	310 aa	Predicted RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TTC14	Q96N46	770 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	C1QTNF1	Q9BXJ1	281 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM39B	Q9GZU3	492 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	CCDC68	Q9H2F9	335 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	HRH4	Q9H3N8	390 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	DNAJC18	Q9H819	358 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	EBF2	Q9HAK2	575 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	NSMCE4A	Q9NXX6	385 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	WWOX	Q9NZC7	414 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	DBNL	Q9UJU6	430 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	RALY	Q9UKM9	306 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-231	ENST00000477334	PCDHAC2	Q9Y5I4	1007 aa		4.14	□□□□□ -1.75
RBM39-231	ENST00000477334		A0A1W2PR77	199 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	CTDSP2	O14595	271 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC16A5	O15375	505 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	MITF	O75030	526 aa	Predicted RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	SNRNP70	P08621	437 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	POLR2C	P19387	275 aa	Predicted RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	HRH2	P25021	359 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	USP8	P40818	1118 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	SUOX	P51687	545 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	FUT6	P51993	359 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	ZNF132	P52740	706 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	PSMC6	P62333	389 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	MRPS5	P82675	430 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	KCNC3	Q14003	757 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM35A	Q53FP2	167 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	CLEC4G	Q6UXB4	293 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	TUBA1A	Q71U36	451 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	AACS	Q86V21	672 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	KMT5C	Q86Y97	462 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	SECTM1	Q8WVN6	248 aa		4.13	□□□□□ -1.75

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