RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TMEM135Q86UB9 458 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SERPINA9Q86WD7 417 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SPNS2Q8IVW8 549 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SFTPA2Q8IWL1 248 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 PHACTR4Q8IZ21 702 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 PDIK1LQ8N165 341 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 RASGEF1AQ8N9B8 481 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 BBOF1Q8ND07 529 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 OR4L1Q8NH43 312 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 GDAP1Q8TB36 358 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 DTX3LQ8TDB6 740 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 IFT81Q8WYA0 676 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 CFAP36Q96G28 342 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 TMEM168Q9H0V1 697 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 ERVMER34-1Q9H9K5 563 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 TRIM39Q9HCM9 518 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SUFUQ9UMX1 484 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 BTBD3Q9Y2F9 522 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 PRSS21Q9Y6M0 314 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SLC30A1Q9Y6M5 507 aa15.71■□□□□ 0.11
COPS3-207ENST00000477299 SGTAO43765 313 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 OR1I1O60431 355 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 PIAS2O75928 621 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 PYGLP06737 847 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 GIMD1P0DJR0 217 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 HTR1BP28222 390 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 RXRGP48443 463 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 HK3P52790 923 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 CTSCP53634 463 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 TMEM115Q12893 351 aaPredicted RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 ITGA9Q13797 1035 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 DBN1Q16643 649 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 STPG1Q5TH74 334 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 ZDHHC20Q5W0Z9 365 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 PDPK2PQ6A1A2 396 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 UNC5AQ6ZN44 842 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 DET1Q7L5Y6 550 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 CCDC25Q86WR0 208 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 NXPE1Q8N323 547 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 BEND7Q8N7W2 519 aaPredicted RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 FBXO36Q8NEA4 188 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 SAP25Q8TEE9 199 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 SGF29Q96ES7 293 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 C19orf43Q9BQ61 176 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 LRRC61Q9BV99 259 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 ZDHHC5Q9C0B5 715 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 CARS2Q9HA77 564 aaKnown RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 SAYSD1Q9NPB0 183 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 TMEM9BQ9NQ34 198 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 RRAGDQ9NQL2 400 aaPredicted RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 SLC23A2Q9UGH3 650 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.7■□□□□ 0.1
COPS3-207ENST00000477299 CRLS1Q9UJA2 301 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 V9GYY5 206 aaPredicted RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
COPS3-207ENST00000477299 GOLGA4Q13439 2230 aaKnown RBP15.7■□□□□ 0.1
COPS3-207ENST00000477299 MAGEB16A2A368 324 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 SMAPO00193 183 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 TNFRSF10CO14798 259 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CD3EAPO15446 510 aaKnown RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 NUAK1O60285 661 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 RASGRP1O95267 797 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CER1O95813 267 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 TNFP01375 233 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 MYF5P13349 255 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CD59P13987 128 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 ITGALP20701 1170 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 DGKAP23743 735 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 AK4P27144 223 aaPredicted RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 ATXN3P54252 364 aaPredicted RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 PRAMEP78395 509 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CACNG1Q06432 222 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 LAMB3Q13751 1172 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 PLA2G4EQ3MJ16 856 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 PYCR3Q53H96 274 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 DNAJC21Q5F1R6 531 aaKnown RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 PRRT3Q5FWE3 981 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 ZNF789Q5FWF6 425 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 TRMT10BQ6PF06 316 aaKnown RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 IL27RAQ6UWB1 636 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CAPN12Q6ZSI9 719 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 NRROSQ86YC3 692 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 ZNF547Q8IVP9 402 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 DDHD1Q8NEL9 900 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 CAMK1GQ96NX5 476 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 DNAAF2Q9NVR5 837 aaKnown RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 SMOXQ9NWM0 555 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 APOBEC3BQ9UH17 382 aaKnown RBP15.69■□□□□ 0.1
COPS3-207ENST00000477299 ZNHIT2Q9UHR6 403 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
COPS3-207ENST00000477299 DGKBQ9Y6T7 804 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms