RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	RTL3	Q8N8U3	475 aa	Known RBP	4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ATP11C	Q8NB49	1132 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PJA1	Q8NG27	643 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OR5M3	Q8NGP4	307 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GANC	Q8TET4	914 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CASKIN2	Q8WXE0	1202 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	UBXN4	Q92575	508 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PDLIM2	Q96JY6	352 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LRRC3B	Q96PB8	259 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NAP1L3	Q99457	506 aa	Predicted RBP	4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF670	Q9BS34	389 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MS4A5	Q9H3V2	200 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DYRK4	Q9NR20	520 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TMEM248	Q9NWD8	314 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ELOVL2	Q9NXB9	296 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PACSIN3	Q9UKS6	424 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NCKAP1	Q9Y2A7	1128 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RAD54B	Q9Y620	910 aa		4.57	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DENND4C	Q5VZ89	1909 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LAMA3	Q16787	3333 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	BRWD1	Q9NSI6	2320 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IGLV3-10	A0A075B6K4	115 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CXorf51A	A0A1B0GTR3	108 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289		A0A1W2PR48	441 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF487	B1APH4	448 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KIF2A	O00139	706 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DFFA	O00273	331 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KLF8	O95600	359 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DNTT	P04053	509 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TUBB4A	P04350	444 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HOXB2	P14652	356 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GOT1	P17174	413 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ERCC2	P18074	760 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	AOC1	P19801	751 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CD72	P21854	359 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	XPA	P23025	273 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KDELR1	P24390	212 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HOXD9	P28356	352 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NTSR1	P30989	418 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	APOBEC3A	P31941	199 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OPRD1	P41143	372 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CSK	P41240	450 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PAFAH1B1	P43034	410 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NR2C2	P49116	596 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DNA2	P51530	1060 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DGKE	P52429	567 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PLK1	P53350	603 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KRTAP10-9	P60411	292 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SNRPD1	P62314	119 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCZ1B	P86790	482 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCZ1	P86791	482 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OGDH	Q02218	1023 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LMAN2	Q12907	356 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF235	Q14590	738 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GRM3	Q14832	879 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PDK1	Q15118	436 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TCEA2	Q15560	299 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PLEKHG6	Q3KR16	790 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TTC31	Q49AM3	519 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	C5orf22	Q49AR2	442 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM133B	Q5BKY9	247 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TFDP3	Q5H9I0	405 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PITRM1	Q5JRX3	1037 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF569	Q5MCW4	686 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM46C	Q5VWP2	391 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KAZN	Q674X7	775 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCDC70	Q6NSX1	233 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TRNP1	Q6NT89	227 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ESPNL	Q6ZVH7	1005 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	BNIPL	Q7Z465	357 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	C11orf74	Q86VG3	221 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TMEM139	Q8IV31	216 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LYSMD2	Q8IV50	215 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KATNAL2	Q8IYT4	538 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NDUFAF2	Q8N183	169 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SPEM1	Q8N4L4	309 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ATPAF2	Q8N5M1	289 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CAMKK1	Q8N5S9	505 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DCAF4L2	Q8NA75	395 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KDM1B	Q8NB78	822 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCNY	Q8ND76	341 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TSTD1	Q8NFU3	115 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EXD1	Q8NHP7	514 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RPLP0P6	Q8NHW5	317 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	P3H4	Q92791	437 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IGSF8	Q969P0	613 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	WBP2	Q969T9	261 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PPP1R16A	Q96I34	528 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRMT1	Q99873	361 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NDC1	Q9BTX1	674 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CINP	Q9BW66	212 aa	Predicted RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	BRD8	Q9H0E9	1235 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PIF1	Q9H611	641 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GPATCH2L	Q9NWQ4	482 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TRMT1	Q9NXH9	659 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MPP6	Q9NZW5	540 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	USP36	Q9P275	1121 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	UBA2	Q9UBT2	640 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms