RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 SLC25A23Q9BV35 468 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 SLC46A2Q9BY10 475 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 SEMA4BQ9NPR2 832 aaPredicted RBP11.39□□□□□ -0.59
NUP188-205ENST00000477069 PLK2Q9NYY3 685 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 FNDC3AQ9Y2H6 1198 aaKnown RBP11.39□□□□□ -0.59
NUP188-205ENST00000477069 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 GPC4O75487 556 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 PRAMEF1O95521 474 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 LRG1P02750 347 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 C8AP07357 584 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 GJA1P17302 382 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 PRDX3P30048 256 aaKnown RBP11.39□□□□□ -0.59
NUP188-205ENST00000477069 HNF1BP35680 557 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 MAPK8P45983 427 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 BCL2L1Q07817 233 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 FBXO48Q5FWF7 155 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 XKR7Q5GH72 579 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 TAS2R42Q7RTR8 314 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
NUP188-205ENST00000477069 SNX31Q8N9S9 440 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 RIN3Q8TB24 985 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 LYSMD1Q96S90 227 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 ZFYVE1Q9HBF4 777 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 SUCOQ9UBS9 1254 aaKnown RBP11.39□□□□□ -0.59
NUP188-205ENST00000477069 GIMAP2Q9UG22 337 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 PSMD13Q9UNM6 376 aa11.39□□□□□ -0.59
NUP188-205ENST00000477069 A6NHS1 94 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 E7ENX8 843 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 TRIM38O00635 465 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 PRMT5O14744 637 aaPredicted RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 CFLARO15519 480 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 CHRM3P20309 590 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 PEX2P28328 305 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 CCR2P41597 374 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 NFATC2Q13469 925 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 FLOT2Q14254 428 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 LPCAT4Q643R3 524 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 OGFOD2Q6N063 350 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SBSNQ6UWP8 590 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 FAM151BQ6UXP7 276 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SNX20Q7Z614 316 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SERPINA9Q86WD7 417 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 UCMAQ8WVF2 138 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 BOCQ9BWV1 1114 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 NUSAP1Q9BXS6 441 aaKnown RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 IL26Q9NPH9 171 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SLC52A3Q9NQ40 469 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 NUDT4Q9NZJ9 180 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 CD300AQ9UGN4 299 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SLC30A1Q9Y6M5 507 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 NOTCH4Q99466 2003 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 NRP2O60462 931 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 MATN4O95460 622 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 ESRRBO95718 433 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 IGSF6O95976 241 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SRCP12931 536 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 MSX2P35548 267 aaPredicted RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 KLC1Q07866 573 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SFT2D3Q587I9 215 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 OGFRL1Q5TC84 451 aaPredicted RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 TPGS1Q6ZTW0 290 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 CCDC149Q6ZUS6 474 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 GPSM1Q86YR5 675 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 PCDH20Q8N6Y1 951 aaKnown RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 LKAAEAR1Q8TD35 194 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 ECHDC3Q96DC8 303 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 ASB9Q96DX5 294 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 TNKS2Q9H2K2 1166 aa11.38□□□□□ -0.59
NUP188-205ENST00000477069 SDR39U1Q9NRG7 319 aaPredicted RBP11.38□□□□□ -0.59
NUP188-205ENST00000477069 C1orf232A0A0U1RR37 186 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 NCF1BA6NI72 391 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 AGAP14A8MT82 685 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 NCF1CA8MVU1 366 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 E5RI56 91 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PEX1O43933 1283 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 CLDN7O95471 211 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 MLYCDO95822 493 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 CAPNS1P04632 268 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 NCF1P14598 390 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 BPIP17213 487 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 ACRV1P26436 265 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 CTSOP43234 321 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 GJA8P48165 433 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 IRX1P78414 480 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 TGFBIQ15582 683 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 PITRM1Q5JRX3 1037 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 CBARPQ8N350 705 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
NUP188-205ENST00000477069 OR2AP1Q8NGE2 309 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 GATA6Q92908 595 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 KLHL32Q96NJ5 620 aa11.37□□□□□ -0.59
NUP188-205ENST00000477069 GPATCH1Q9BRR8 931 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms