RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 RAVER1Q8IY67 606 aaKnown RBP12.29□□□□□ -0.44
APTX-220ENST00000476858 NAGSQ8N159 534 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
APTX-220ENST00000476858 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 VPS35Q96QK1 796 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 NAPGQ99747 312 aaPredicted RBP12.29□□□□□ -0.44
APTX-220ENST00000476858 TRIM39Q9HCM9 518 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
APTX-220ENST00000476858 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
APTX-220ENST00000476858 VPS18Q9P253 973 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 TBC1D29Q9UFV1 150 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 PKP3Q9Y446 797 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 RNF215Q9Y6U7 377 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 CEP295Q9C0D2 2601 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
APTX-220ENST00000476858 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 EME2A4GXA9 379 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 A6NCN8 305 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 PRR19A6NJB7 356 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 CHUKO15111 745 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 GRID2O43424 1007 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 OPA1O60313 960 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 SRP72O76094 671 aaKnown RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 ECEL1O95672 775 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 F7P08709 466 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 MC4RP32245 332 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 PTGIRP43119 386 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 TNNT3P45378 269 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 SESN2P58004 480 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 SHC2P98077 582 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
APTX-220ENST00000476858 SEMA3AQ14563 771 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 KCNJ11Q14654 390 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 NR0B2Q15466 257 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 CES3Q6UWW8 571 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 FAM83HQ6ZRV2 1179 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 TMPRSS7Q7RTY8 843 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 TMPRSS9Q7Z410 1059 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 PHYKPLQ8IUZ5 450 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 MPP5Q8N3R9 675 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 LILRA3Q8N6C8 439 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 ARL10Q8N8L6 244 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 Q8N9G6 341 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 OR13J1Q8NGT2 312 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 ZNF398Q8TD17 642 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 MAIP1Q8WWC4 291 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 CPT1BQ92523 772 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 GATA6Q92908 595 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 MFRPQ9BY79 579 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 DPEP2Q9H4A9 486 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 ASB8Q9H765 288 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 PRDM8Q9NQV8 689 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 NLE1Q9NVX2 485 aaPredicted RBP12.28□□□□□ -0.44
APTX-220ENST00000476858 ANGPTL2Q9UKU9 493 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 DNAJC16Q9Y2G8 782 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 PCDHB1Q9Y5F3 818 aa12.28□□□□□ -0.44
APTX-220ENST00000476858 A0A1W2PQM1 296 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 OR2AG2A6NM03 316 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 C2orf81A6NN90 581 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 E7EVH7 732 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 AGRPO00253 132 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 PPM1DO15297 605 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 SNX2O60749 519 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 PYGLP06737 847 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 MGAT1P26572 445 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 LMAN1P49257 510 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 PDX1P52945 283 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CCL7P80098 99 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CDH17Q12864 832 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
APTX-220ENST00000476858 NFATC2Q13469 925 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CAND1Q86VP6 1230 aaKnown RBP12.27□□□□□ -0.45
APTX-220ENST00000476858 KLHL7Q8IXQ5 586 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 ARL14Q8N4G2 192 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 DNAAF3Q8N9W5 541 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 DDHD1Q8NEL9 900 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 GDAP1Q8TB36 358 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 ZDHHC1Q8WTX9 485 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 SGF29Q96ES7 293 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CDKN2AIPNLQ96HQ2 116 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 SRPK1Q96SB4 655 aaKnown RBP12.27□□□□□ -0.45
APTX-220ENST00000476858 CCDC3Q9BQI4 270 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 GSDMCQ9BYG8 508 aa12.27□□□□□ -0.45
APTX-220ENST00000476858 CHRAC1Q9NRG0 131 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms