RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C15orf38-AP3S2A0A0A6YYH1 394 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 STX7O15400 261 aaKnown RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 ECI2O75521 394 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 CRCPO75575 148 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 RNASEH2AO75792 299 aaKnown RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 CXCL14O95715 111 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 MT-CO1P00395 513 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 PPP3CCP48454 512 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 RPS6KA2Q15349 733 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 IL23RQ5VWK5 629 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 UGT3A1Q6NUS8 523 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 PSRC1Q6PGN9 363 aaPredicted RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 ARPINQ7Z6K5 226 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 MINDY1Q8N5J2 469 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 ATP6V1E2Q96A05 226 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 FUBP1Q96AE4 644 aaKnown RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 TUBGCP3Q96CW5 907 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 NSUN5Q96P11 429 aaKnown RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 GPATCH1Q9BRR8 931 aaKnown RBP16.32■□□□□ 0.2
TMEM53-208ENST00000476724 PCDHAC1Q9H158 963 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 DENND4CQ5VZ89 1909 aa16.32■□□□□ 0.2
TMEM53-208ENST00000476724 LAMA3Q16787 3333 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 PPP6CO00743 305 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TLL1O43897 1013 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 CHEK2O96017 543 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 PABPC4LP0CB38 370 aaKnown RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 PRSS56P0CW18 603 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 IRF1P10914 325 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 MC4RP32245 332 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 ATXN3P54252 364 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 EPHB3P54753 998 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 FOXA1P55317 472 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 IL2P60568 153 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 INO80DQ53TQ3 878 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 SLC30A9Q6PML9 568 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 STK40Q8N2I9 435 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 EXOC2Q96KP1 924 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 RAD9AQ99638 391 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 CCT7Q99832 543 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 MUC3BQ9H195 1237 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TUBB1Q9H4B7 451 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 PAPOLBQ9NRJ5 636 aaKnown RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 ABCD2Q9UBJ2 740 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TRMT6Q9UJA5 497 aaKnown RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 PCDHGC4Q9Y5F7 938 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 SLC4A7Q9Y6M7 1214 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 DOCK6Q96HP0 2047 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 LRRC14BA6NHZ5 514 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 ANGPT2O15123 496 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 ESRRBO95718 433 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 HGFP14210 728 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 SLC7A2P52569 658 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 FOXM1Q08050 763 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TSNQ15631 228 aaKnown RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 LAYNQ6UX15 382 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 ZNF483Q8TF39 744 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 KCNJ9Q92806 393 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 EME1Q96AY2 570 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 KLF16Q9BXK1 252 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-208ENST00000476724 IL21Q9HBE4 155 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 TMEM45AQ9NWC5 275 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 MAP10Q9P2G4 905 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 POLG2Q9UHN1 485 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 STOML2Q9UJZ1 356 aa16.31■□□□□ 0.2
TMEM53-208ENST00000476724 GOLGA8CPA6NN73 597 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 HIDE1A8MVS5 230 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-208ENST00000476724 MAP3K13O43283 966 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ARHGEF15O94989 841 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 LATS1O95835 1130 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ESR1P03372 595 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 UROSP10746 265 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 PTGER3P43115 390 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ARF5P84085 180 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 RALGDSQ12967 914 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 GRB7Q14451 532 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 CXorf57Q6NSI4 855 aaKnown RBP16.3■□□□□ 0.2
TMEM53-208ENST00000476724 NCEH1Q6PIU2 408 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 GPR65Q8IYL9 337 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 AHI1Q8N157 1196 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 GALNT15Q8N3T1 639 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 GOLM1Q8NBJ4 401 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ZFAND2BQ8WV99 257 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 TRIM15Q9C019 465 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 EPB41L1Q9H4G0 881 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SEMA4BQ9NPR2 832 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-208ENST00000476724 PLK2Q9NYY3 685 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 FKBPLQ9UIM3 349 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SMIM31A0A1B0GVY4 71 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 CDC7O00311 574 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms