RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TUBGCP3Q96CW5 907 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 RPL10LQ96L21 214 aaKnown RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 SMG9Q9H0W8 520 aaKnown RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 TLR9Q9NR96 1032 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 TRMT6Q9UJA5 497 aaKnown RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 C15orf38-AP3S2A0A0A6YYH1 394 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 PRORSD1PA6NEY8 169 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 E5RI56 91 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 CASQ2O14958 399 aaPredicted RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 NRP2O60462 931 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 PYGLP06737 847 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 ATP6V1B1P15313 513 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 LCP2Q13094 533 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 IL23RQ5VWK5 629 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 ARPINQ7Z6K5 226 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 RETREG3Q86VR2 466 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 PHYKPLQ8IUZ5 450 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 PIH1D2Q8WWB5 315 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 TRAPPC9Q96Q05 1148 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 ACOX2Q99424 681 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 TNKS2Q9H2K2 1166 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
TVP23B-202ENST00000476139 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 PKP3Q9Y446 797 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 ZNF711Q9Y462 761 aa16.5■□□□□ 0.23
TVP23B-202ENST00000476139 BCAS2O75934 225 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CKMP06732 381 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 HGFP14210 728 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 HMGCLP35914 325 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 PPP3CCP48454 512 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 IL2P60568 153 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 ATP6V0D1P61421 351 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 VPS26BQ4G0F5 336 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 ANKS6Q68DC2 871 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 UGT2A3Q6UWM9 527 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 HJURPQ8NCD3 748 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 POLG2Q9UHN1 485 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 GFRA2O00451 464 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 MRASO14807 208 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 PARNO95453 639 aaKnown RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CSF2RAP15509 400 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 ITGB6P18564 788 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 NELFEP18615 380 aaKnown RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CHN2P52757 468 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 DIO3P55073 304 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CDKL1Q00532 357 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 C18orf21Q32NC0 220 aaPredicted RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 GALNT15Q8N3T1 639 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 NKAPQ8N5F7 415 aaKnown RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CLDN19Q8N6F1 224 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 CDK15Q96Q40 435 aa16.49■□□□□ 0.23
TVP23B-202ENST00000476139 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
TVP23B-202ENST00000476139 A0A0J9YYE9 177 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 ADGRE1Q14246 886 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 ARMC12Q5T9G4 340 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 ZNF783Q6ZMS7 281 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 DDX53Q86TM3 631 aaKnown RBP16.48■□□□□ 0.23
TVP23B-202ENST00000476139 ASB2Q96Q27 587 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 SLC25A23Q9BV35 468 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 SPATA16Q9BXB7 569 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 RC3H2Q9HBD1 1191 aaKnown RBP16.48■□□□□ 0.23
TVP23B-202ENST00000476139 C6orf203Q9P0P8 240 aaPredicted RBP16.48■□□□□ 0.23
TVP23B-202ENST00000476139 RIMS3Q9UJD0 308 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
TVP23B-202ENST00000476139 TGM5O43548 720 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 PGLSO95336 258 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 ACRP10323 421 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 SOX11P35716 441 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 CLCN7P51798 805 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
TVP23B-202ENST00000476139 SYVN1Q86TM6 617 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 PAF1Q8N7H5 531 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 KCNJ9Q92806 393 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 PLEKHG4BQ96PX9 1271 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 HERC2P3Q9BVR0 1158 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 CFAP97Q9P2B7 532 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 AP4B1Q9Y6B7 739 aa16.48■□□□□ 0.23
TVP23B-202ENST00000476139 H7C0S8 307 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 NR5A2O00482 541 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 TRIM38O00635 465 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 PEX1O43933 1283 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 CLDN7O95471 211 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 OLFM2O95897 454 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 RPS17P08708 135 aaKnown RBP16.47■□□□□ 0.23
TVP23B-202ENST00000476139 CNPP09543 421 aaKnown RBP16.47■□□□□ 0.23
TVP23B-202ENST00000476139 UGT1A6P19224 532 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 UGT1A1P22309 533 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 UGT1A4P22310 534 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 UGT1A3P35503 534 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 UGT1A5P35504 534 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 TRIM25Q14258 630 aaKnown RBP16.47■□□□□ 0.23
TVP23B-202ENST00000476139 MAPRE2Q15555 327 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 GPSM1Q86YR5 675 aa16.47■□□□□ 0.23
TVP23B-202ENST00000476139 APLFQ8IW19 511 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms