RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MYBPHLA2RUH7 354 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TMEM233B4DJY2 109 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 NME4O00746 187 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 PER2O15055 1255 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 UBDO15205 165 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ZSCAN9O15535 394 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 ZNF623O75123 536 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 GLP2RO95838 553 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 NPPAP01160 153 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 EPOP01588 193 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 GPIP06744 558 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 LTA4HP09960 611 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 UMPSP11172 480 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 IMPDH2P12268 514 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ENO3P13929 434 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 CPB1P15086 417 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 TPH1P17752 444 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ATP6V1B2P21281 511 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 FDXRP22570 491 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SLC6A2P23975 617 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 AKAP5P24588 427 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 RPL9P32969 192 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 PBX3P40426 434 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ABCG1P45844 678 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 MLLT6P55198 1093 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 NME5P56597 212 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 NUP107P57740 925 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ERVFC1P60507 584 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ADARB1P78563 741 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 CTBP1Q13363 440 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 FASTKQ14296 549 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 FAM83EQ2M2I3 478 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBR4-212ENST00000475973 SETMARQ53H47 684 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 XKR7Q5GH72 579 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 MTX3Q5HYI7 312 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 RBM20Q5T481 1227 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 AGAP9Q5VTM2 703 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 BSPRYQ5W0U4 402 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 KANK2Q63ZY3 851 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TIGD7Q6NT04 549 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 NEPROQ6NW34 567 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 MSANTD2Q6P1R3 559 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 IYDQ6PHW0 289 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 RNF165Q6ZSG1 346 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 FKBP9P1Q75LS8 142 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 AMIGO2Q86SJ2 522 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ZNF354CQ86Y25 554 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CILP2Q8IUL8 1156 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SIX6OS1Q8N1H7 587 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CHCHD4Q8N4Q1 142 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 RTL3Q8N8U3 475 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 LEMD2Q8NC56 503 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 HIPK4Q8NE63 616 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 OR52E4Q8NGH9 312 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SPATA22Q8NHS9 363 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ARRDC2Q8TBH0 407 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 GRIN3AQ8TCU5 1115 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CALML6Q8TD86 181 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 DQX1Q8TE96 717 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 ANKRD49Q8WVL7 239 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 USP13Q92995 863 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 TMIGD2Q96BF3 282 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 FAM149B1Q96BN6 582 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SENP8Q96LD8 212 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CNBD2Q96M20 576 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 NECTIN4Q96NY8 510 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ATOH8Q96SQ7 321 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 ACBD6Q9BR61 282 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TRIM62Q9BVG3 475 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 PHF7Q9BWX1 381 aaPredicted RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 BRINP2Q9C0B6 783 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 GRIP2Q9C0E4 1043 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SLC39A8Q9C0K1 460 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TKTL2Q9H0I9 626 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 PCDHAC1Q9H158 963 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SMOC2Q9H3U7 446 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 WDCPQ9H6R7 721 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 EML4Q9HC35 981 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 PALMDQ9NP74 551 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 DZANK1Q9NVP4 752 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 DDIT4Q9NX09 232 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CMTM6Q9NX76 183 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SEPT10Q9P0V9 454 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 CLEC1BQ9P126 229 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 SLC2A6Q9UGQ3 507 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 GPR45Q9Y5Y3 372 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 OAS3Q9Y6K5 1087 aaKnown RBP6.83□□□□□ -1.32
UBR4-212ENST00000475973 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
UBR4-212ENST00000475973 TRIP12Q14669 1992 aaPredicted RBP6.82□□□□□ -1.32
UBR4-212ENST00000475973 E2F8A0AVK6 867 aa6.82□□□□□ -1.32
UBR4-212ENST00000475973 FAM92AA1XBS5 289 aa6.82□□□□□ -1.32
UBR4-212ENST00000475973 NEMP2A6NFY4 417 aa6.82□□□□□ -1.32
UBR4-212ENST00000475973 F5H423 210 aaPredicted RBP6.82□□□□□ -1.32
UBR4-212ENST00000475973 H0YAE9 185 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms