RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DPYSL5Q9BPU6 564 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 NUDT22Q9BRQ3 303 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 SPATA16Q9BXB7 569 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 TRMT1Q9NXH9 659 aaKnown RBP14.99□□□□□ -0.01
VARS-223ENST00000474643 FAM153AQ9UHL3 310 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 PRKAB1Q9Y478 270 aa14.99□□□□□ -0.01
VARS-223ENST00000474643 ANKRD66B4E2M5 251 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 HGSO14964 777 aaPredicted RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 B4GAT1O43505 415 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 FUCA1P04066 466 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 ATP1A1P05023 1023 aaKnown RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 CD82P27701 267 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 MAPK9P45984 424 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 SPINT3P49223 89 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 GPLD1P80108 840 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 B4GALNT1Q00973 533 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 CDK18Q07002 472 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 ZFP36L1Q07352 338 aaKnown RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 PRPSAP1Q14558 356 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 PYCR3Q53H96 274 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 NKAIN2Q5VXU1 208 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 KIAA1614Q5VZ46 1190 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 ALS2CLQ60I27 953 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 NLRP8Q86W28 1048 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 SLITRK4Q8IW52 837 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 RAVER1Q8IY67 606 aaKnown RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 NAGSQ8N159 534 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 CBARPQ8N350 705 aaPredicted RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 AGBL5Q8NDL9 886 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 PTCD2Q8WV60 388 aaKnown RBP14.98□□□□□ -0.01
VARS-223ENST00000474643 GPR63Q9BZJ6 419 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 CARD9Q9H257 536 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 OSGEPL1Q9H4B0 414 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 ZFYVE1Q9HBF4 777 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 RAD18Q9NS91 495 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 VPS18Q9P253 973 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 PLEKHM1Q9Y4G2 1056 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 KIF26BQ2KJY2 2108 aa14.98□□□□□ -0.01
VARS-223ENST00000474643 COL27A1Q8IZC6 1860 aaPredicted RBP14.97□□□□□ -0.01
VARS-223ENST00000474643 RGSL1A5PLK6 1076 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 SOD1P00441 154 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 ACP5P13686 325 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 ATP1A2P50993 1020 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 HHEXQ03014 270 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 NFATC2Q13469 925 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 TRA2AQ13595 282 aaKnown RBP eCLIP14.97□□□□□ -0.01
VARS-223ENST00000474643 LY6DQ14210 128 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 IHHQ14623 411 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 TGIF1Q15583 401 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 QPCTQ16769 361 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 SNAP47Q5SQN1 464 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 LYSMD3Q7Z3D4 306 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 ZNF438Q7Z4V0 828 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 SLC13A5Q86YT5 568 aaPredicted RBP14.97□□□□□ -0.01
VARS-223ENST00000474643 IPMKQ8NFU5 416 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 OR4D9Q8NGE8 314 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 SH3KBP1Q96B97 665 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 LRRC45Q96CN5 670 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 WBP1Q96G27 269 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 FCRL5Q96RD9 977 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 AGAP2Q99490 1192 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 FSD1LQ9BXM9 530 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 RMI1Q9H9A7 625 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 SHOC2Q9UQ13 582 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 KCNK6Q9Y257 313 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 JRKLQ9Y4A0 524 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 KALRNO60229 2985 aa14.97□□□□□ -0.01
VARS-223ENST00000474643 IGHV5-10-1A0A0J9YXX1 117 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 TCRBV7S2A1N4TA0A589 114 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 STMND1H3BQB6 276 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 CEP104O60308 925 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ANXA9O76027 345 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 SLC25A14O95258 325 aaPredicted RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 NDST3O95803 873 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 PRLP01236 227 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 MPSTP25325 297 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 CD68P34810 354 aaPredicted RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 ETV5P41161 510 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 GEMP55040 296 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 WNT3AP56704 352 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 KLF1Q13351 362 aaPredicted RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 NR1D2Q14995 579 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 C16orf72Q14CZ0 275 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 SLC14A2Q15849 920 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 INSCQ1MX18 579 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ANKRD20A2Q5SQ80 823 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ANKRD20A1Q5TYW2 823 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ANKRD20A3Q5VUR7 823 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ARHGEF18Q6ZSZ5 1173 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 TMPRSS9Q7Z410 1059 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 SLC9B2Q86UD5 537 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ZFAND4Q86XD8 727 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ZNF761Q86XN6 746 aaPredicted RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 TRIM48Q8IWZ4 208 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ZNF843Q8N446 348 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 AVL9Q8NBF6 648 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 CCDC110Q8TBZ0 833 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 SLC37A2Q8TED4 501 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 MAIP1Q8WWC4 291 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 SGF29Q96ES7 293 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms