RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 C17orf82Q86X59 251 aaPredicted RBP15.81■□□□□ 0.12
ITGB1-210ENST00000474568 NAT14Q8WUY8 206 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 LRRC45Q96CN5 670 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 DCBLD2Q96PD2 775 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 PPP1R2P1Q96PQ5 205 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.81■□□□□ 0.125e-6■□□□□ 9.7
ITGB1-210ENST00000474568 TBC1D29Q9UFV1 150 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 SLC23A2Q9UGH3 650 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 APPL1Q9UKG1 709 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 SATB2Q9UPW6 733 aa15.81■□□□□ 0.12
ITGB1-210ENST00000474568 USP24Q9UPU5 2620 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 A0A1W2PNU3 283 aaPredicted RBP15.8■□□□□ 0.12
ITGB1-210ENST00000474568 CCDC78A2IDD5 438 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 D6RAR5 112 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 PPM1DO15297 605 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 B4GAT1O43505 415 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 FGGP02679 453 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 B4GALNT1Q00973 533 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 PEX6Q13608 980 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 SEPT7Q16181 437 aaKnown RBP15.8■□□□□ 0.12
ITGB1-210ENST00000474568 P3H1Q32P28 736 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 NKAIN2Q5VXU1 208 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 ZDHHC20Q5W0Z9 365 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 KCTD11Q693B1 232 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 USP53Q70EK8 1073 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 LRRTM4Q86VH4 590 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 TRAPPC5Q8IUR0 188 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 WDR48Q8TAF3 677 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 SLC37A2Q8TED4 501 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 TTC25Q96NG3 672 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 VPS35Q96QK1 796 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 LRRC40Q9H9A6 602 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 RDH14Q9HBH5 336 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 PRDM8Q9NQV8 689 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 FREM2Q5SZK8 3169 aa15.8■□□□□ 0.12
ITGB1-210ENST00000474568 RP1P56715 2156 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 TLX3O43711 291 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 VEGFDO43915 354 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 PRAMEF1O95521 474 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 CRTAMO95727 393 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 ZSCAN5DPP0CG00 497 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 AKT1P31749 480 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 LMAN1P49257 510 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 INHBCP55103 352 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 TMEM115Q12893 351 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 MSLNQ13421 630 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 NFATC2Q13469 925 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 POU6F1Q14863 301 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 SIX1Q15475 284 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 LONRF2Q1L5Z9 754 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 MAP9Q49MG5 647 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 GPRC6AQ5T6X5 926 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 C19orf48Q6RUI8 117 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 DET1Q7L5Y6 550 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 TMPRSS9Q7Z410 1059 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 ZNF547Q8IVP9 402 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 KLHDC8BQ8IXV7 354 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 GLIS1Q8NBF1 620 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 ZNF398Q8TD17 642 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 BRSK1Q8TDC3 778 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 RTP4Q96DX8 246 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 DNAJC1Q96KC8 554 aaKnown RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 FRMD8P1Q9BZ68 369 aaPredicted RBP15.79■□□□□ 0.12
ITGB1-210ENST00000474568 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 KCNF1Q9H3M0 494 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 FAM96AQ9H5X1 160 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 DKK4Q9UBT3 224 aa15.79■□□□□ 0.12
ITGB1-210ENST00000474568 PDZK1P1A8MUH7 402 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 CHUKO15111 745 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 KMOO15229 486 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 PPFIA2O75334 1257 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 AP2A1O95782 977 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 PNLIPP16233 465 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ZNF7P17097 686 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 PBLDP30039 288 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 STIP1P31948 543 aaKnown RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ACTN2P35609 894 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ZNF140P52738 457 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 CTSCP53634 463 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ITGA9Q13797 1035 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 SFRP1Q8N474 314 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 RASGEF1AQ8N9B8 481 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 OR52K1Q8NGK4 314 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 HNRNPLLQ8WVV9 542 aaKnown RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 NUDT22Q9BRQ3 303 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ASB8Q9H765 288 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 POLR1BQ9H9Y6 1135 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 ARNT2Q9HBZ2 717 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 RAB6BQ9NRW1 208 aa15.78■□□□□ 0.12
ITGB1-210ENST00000474568 TRMT1Q9NXH9 659 aaKnown RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 SCHIP1Q9P0W5 487 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-210ENST00000474568 CACNA1BQ00975 2339 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 MYLKQ15746 1914 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 OR2AG2A6NM03 316 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 E7EVH7 732 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 PSMD3O43242 534 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 SRP72O76094 671 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms