RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 KRT86O43790 486 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PPFIA2O75334 1257 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CDK14O94921 469 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PSMB4P28070 264 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 ADRA1AP35348 466 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 FASLGP48023 281 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CLCNKAP51800 687 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 RP1P56715 2156 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 ACACAQ13085 2346 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 KLF1Q13351 362 aaPredicted RBP11.05□□□□□ -0.64
CKS1B-206ENST00000474215 SQSTM1Q13501 440 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 TMPRSS9Q7Z410 1059 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 GLT6D1Q7Z4J2 308 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PDZD3Q86UT5 571 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 SLITRK4Q8IW52 837 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 COL27A1Q8IZC6 1860 aaPredicted RBP11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 SLC37A2Q8TED4 501 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PPP1R2P1Q96PQ5 205 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 TSGA10Q9BZW7 698 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 RDH14Q9HBH5 336 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 GUCA1BQ9UMX6 200 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 PKP3Q9Y446 797 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 CAPN6Q9Y6Q1 641 aa11.05□□□□□ -0.64
CKS1B-206ENST00000474215 IGHV1OR21-1A0A087WYE8 117 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 GLYATL1P3A0A0U1RQE8 302 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 TCRBV7S2A1N4TA0A589 114 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 A6NCN8 305 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 OR5K4A6NMS3 321 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 C2orf81A6NN90 581 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 STX7O15400 261 aaKnown RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A9O60656 530 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SNX2O60749 519 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 MTX2O75431 263 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 F3P13726 295 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SLC2A4P14672 509 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF7P17097 686 aaPredicted RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A6P19224 532 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A1P22309 533 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A4P22310 534 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A3P35503 534 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A5P35504 534 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SPAM1P38567 509 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 TMEM115Q12893 351 aaPredicted RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 CHRNA6Q15825 494 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 PARP6Q2NL67 630 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 KHDC1Q4VXA5 237 aaKnown RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 PHF19Q5T6S3 580 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 NKAIN2Q5VXU1 208 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF574Q6ZN55 896 aaPredicted RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 CLEC14AQ86T13 490 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 LRRTM4Q86VH4 590 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SPACA3Q8IXA5 215 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 FAM71DQ8N9W8 422 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 GDAP1Q8TB36 358 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SLC35B2Q8TB61 432 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 BRSK1Q8TDC3 778 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SH3KBP1Q96B97 665 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 NAF1Q96HR8 494 aaKnown RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 TTC25Q96NG3 672 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 APOL2Q9BQE5 337 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 NUDT22Q9BRQ3 303 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 DPH1Q9BZG8 443 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SEMA6CQ9H3T2 930 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SARS2Q9NP81 518 aaKnown RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 PRDM8Q9NQV8 689 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 KLC4Q9NSK0 619 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 KCNK4Q9NYG8 393 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 SLC23A2Q9UGH3 650 aa11.04□□□□□ -0.64
CKS1B-206ENST00000474215 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
CKS1B-206ENST00000474215 CELSR3Q9NYQ7 3312 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 KIR2DS5A0A0G2JLQ3 304 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 A0A0G2JNG1 304 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 IGHV5-10-1A0A0J9YXX1 117 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 KIR2DS3K7RE56 304 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 JMJD7P0C870 316 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 LPOP22079 712 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 GPLD1P80108 840 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 HHEXQ03014 270 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 TLE3Q04726 772 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 MSLNQ13421 630 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 OLIG2Q13516 323 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ITGA9Q13797 1035 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 KIR2DS5Q14953 304 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 TAF1AQ15573 450 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 INSCQ1MX18 579 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 LDLRAP1Q5SW96 308 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 DENND5AQ6IQ26 1287 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 CRTC3Q6UUV7 619 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms